Job Description P33898 Confidence 100.00% Date Thu Jan 5 11:52:40 GMT 2012 Rank 69 Aligned Residues 296 % Identity 19% Template c2hjsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:usg-1 protein homolog; PDBTitle: the structure of a probable aspartate-semialdehyde dehydrogenase from2 pseudomonas aeruginosa Resolution 2.20 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																.
Query SS confidence										.																.
Query Sequence		S	K	V	G	I	N	G	F	.	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	.	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E
Query Conservation										.																.
Alig confidence										.																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	V	A	V	V	G	A	T	G	S	V	G	E	A	L	V	G	L	L	D	E	R	D	F	P	L	H	R	L	H	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	E	S	A	G	Q	R	X	G	F	A	E	S	S	L	R	V	G	D	V	D	S
Template Known Secondary structure								T	T	T	S													T	T				S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T						T	T								G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																														.	.																	.	.
Query SS confidence																																														.	.																	.	.
Query Sequence		A	K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	.	.	G	E	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	.	.	G	N	D	T	I	V	S	V	A	S	C	T	T	N	C	L
Query Conservation																																														.	.																	.	.
Alig confidence		.	.	.	.	.																																								.	.																	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	F	D	F	S	S	V	G	L	A	F	F	A	A	A	A	E	V	S	R	A	H	A	E	R	A	R	A	A	G	C	S	V	I	D	L	S	G	A	L	E	P	S	V	A	P	P	V	X	V	S	V	N	A	E	R	L	A	S	Q	A	A	P	F	L	L	S	S	P	C	A	V	A	A	E	L
Template Known Secondary structure		.	.	.	.	.			G	G	G		S						S															T	T						T	T		T	T	T	T	T	T	S		B							G	G	G	G	G	G	S		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query Sequence		A	P	M	A	K	A	L	H	D	S	F	G	I	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	E	V	L	A	P	L	L	A	T	L	D	C	R	Q	L	N	L	T	A	C	L	S	V	S	S	L	G	R	E	G	V	K	E	L	A	R	Q	T	A	E	L	L	N	A	R	P	L	E	P	R	L	F	D	R	Q	I	A	F	N	L	L	A	Q	V	G	A	V	D	A	E	G	H	S	A	I	E	R	R	I
Template Known Secondary structure									T	T	T														G	G	G	G																	T	T						S	S	S	S	S			T	T			B	S	S	S	S		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
					215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.																																																																													.
Query SS confidence		.	.	.																																																																													.
Query Sequence		.	.	.	I	G	L	V	I	P	E	L	S	G	K	L	K	G	H	A	Q	R	V	P	V	K	T	G	S	V	T	E	L	V	S	I	L	G	K	K	V	T	A	E	E	V	N	N	A	L	K	Q	A	T	T	N	N	E	S	F	G	Y	T	D	E	E	I	V	S	S	D	I	I	G	S	H	F	G	S	V	.
Query Conservation		.	.	.																																																																													.
Alig confidence		.	.	.																																																		.																											.
Template Conservation																																																						.
Template Sequence		F	A	E	V	Q	A	L	L	G	E	R	I	G	P	L	N	V	T	C	I	Q	A	P	V	F	F	G	D	S	L	S	V	T	L	Q	C	A	E	P	V	D	L	A	A	V	T	R	V	L	D	A	T	.	K	G	I	E	W	V	G	E	G	D	Y	P	T	V	V	G	D	A	L	G	Q	D	E	T	Y	V	G
Template Known Secondary structure									T	G	G	G	B											S		S	S											S	S														S	.	T	T						T	T										T	T	S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
			291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.																										.
Query SS confidence		.																										.
Query Sequence		.	F	D	A	T	Q	T	E	I	T	A	V	G	D	L	Q	L	V	K	T	V	A	W	Y	D	N	.	E	Y	G	F	V	T	Q	L	I	R	T	L	E	K	F	A	K
Query Conservation		.																										.
Alig confidence		.						.	.	.		.	.	.														.
Template Conservation								.	.	.		.	.	.
Template Sequence		R	V	R	A	G	Q	.	.	.	A	.	.	.	D	P	C	Q	V	N	L	W	I	V	S	D	N	V	R	K	G	A	A	L	N	A	V	L	L	G	E	L	L	I	K
Template Known Secondary structure							S	.	.	.	S	.	.	.		T	T
Template Predicted Secondary structure								.	.	.		.	.	.
Template SS confidence
		296	.	.	.	300	.				.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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