Return to main results Retrieve Phyre Job Id

Job DescriptionP33898
Confidence88.15%DateThu Jan 5 11:52:40 GMT 2012
Rank413Aligned Residues100
% Identity19%Templatec2exxB_
PDB info PDB header:unknown functionChain: B: PDB Molecule:hscarg protein; PDBTitle: crystal structure of hscarg from homo sapiens in complex with nadp
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2....... 10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

.


























Query SS confidence 







.






































































Query Sequence  SKVGINGF. GRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKEA
Query Conservation 







.




 


 


    







       



  

  
     
      
 
 
  
 
     
Alig confidence 







.











.























.....................












Template Conservation 
 







 

  
   

.  
   
    
            .....................  
  
  
    
Template Sequence  KLVVVFGGTGAQGGSVARTLL. EDGTFKVRVVTRNPRKKAAKELRL. . . . . . . . . . . . . . . . . . . . . QGAEVVQGDQDDQ
Template Known Secondary structure 
TTTS.
SSSSTTS.....................TT


SS
Template Predicted Secondary structure 




.














.....................







Template SS confidence 















































































   5....10.........20..... ....30.........40......... 50.........60..
 
   81........90.........100... ......110.........120...
Predicted Secondary structure 















..........







Query SS confidence 






















. . . . . . . . . .



















Query Sequence  KNIPWKAKGAEIIVECTGFYTSA. . . . . . . . . . EKSQAHLDAGAKKVLISAPA
Query Conservation    
 
   






 

 
   ..........  
  

 



 





 
Alig confidence 






















..........



















Template Conservation       
    
 
   
                         

   
  
  
Template Sequence  VIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE
Template Known Secondary structure  TT
S

SSS
S
TT




Template Predicted Secondary structure 


















Template SS confidence 




















































   63......70.........80.........90.........100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions