Job Description P33898 Confidence 100.00% Date Thu Jan 5 11:52:40 GMT 2012 Rank 3 Aligned Residues 325 % Identity 49% Template c2ep7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: structural study of project id aq_1065 from aquifex aeolicus vf5 Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A	K
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		I	K	V	G	I	N	G	F	G	R	I	G	R	S	F	F	R	A	S	W	.	G	R	E	E	I	E	I	V	A	I	N	D	L	T	D	A	K	H	L	A	H	L	L	K	Y	D	S	V	H	G	I	F	K	G	S	V	E	A	K	D	D	S	I	V	V	D	G	K	E	I	K	V	F	A	Q	K	D	P	S
Template Known Secondary structure										S										T	T	.	T		T	T									S	S													T	T	T				S	S						S	S					T	T									S	S	G	G
Template Predicted Secondary structure																						.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.														.
Query SS confidence																																															.														.
Query Sequence		N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E	M	.	K	T	I	V	Y	N	V	N	D	D	T	L	D	.	G	N	D	T	I	V	S	V	A	S	C	T	T	N	C	L	A	P	M	A
Query Conservation																																															.														.
Alig confidence																																															.														.
Template Conservation
Template Sequence		Q	I	P	W	G	D	L	G	V	D	V	V	I	E	A	T	G	V	F	R	D	R	E	N	A	S	K	H	L	Q	G	G	A	K	K	V	I	I	T	A	P	A	K	N	P	D	I	T	V	V	L	G	V	N	E	E	K	Y	N	P	K	E	H	N	I	I	S	N	A	S	C	T	T	N	C	L	A	P	C	V
Template Known Secondary structure		G							T		S						S	S	S			S					T	T	T	T	T	T	T		S					S	S			S	S		S					T	T	T	T	G	G	G			T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	H	D	S	F	G	I	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L	V	I	P	E	L	S	G	K	L	K	G	H	A	Q	R	V	P	V	K	T	G	S
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		K	V	L	N	E	A	F	G	V	E	K	G	Y	M	V	T	V	H	A	Y	T	N	D	Q	R	L	L	D	L	P	H	.	K	D	F	R	R	A	R	A	A	A	I	N	I	V	P	T	T	T	G	A	A	K	A	I	G	E	V	I	P	E	L	K	G	K	L	D	G	T	A	R	R	V	P	V	P	D	G	S
Template Known Secondary structure																							T	T	S	B	S	S	S				.	S	S	T	T	T	T	S	B	G	G	G									T	T	T	T	G	G	G	T	S	G	G	G	T	T	T									S		S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																		.	.	.	.	.	.	.	.	.
Query SS confidence												.																		.	.	.	.	.	.	.	.	.
Query Sequence		V	T	E	L	V	S	I	L	G	K	.	K	V	T	A	E	E	V	N	N	A	L	K	Q	A	T	T	N	.	.	.	.	.	.	.	.	.	N	E	S	F	G	Y	T	D	E	E	I	V	S	S	D	I	I	G	S	H	F	G	S	V	F	D	A	T	Q	T	E	I	T	A	V	G	D	L	Q	L	V	K	T
Query Conservation												.																		.	.	.	.	.	.	.	.	.
Alig confidence												.																		.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		L	I	D	L	T	V	V	V	N	K	A	P	S	S	V	E	E	V	N	E	K	F	R	E	A	A	Q	K	Y	R	E	S	G	K	V	Y	L	K	E	I	L	Q	Y	C	E	D	P	I	V	S	T	D	I	V	G	N	P	H	S	A	I	F	D	A	P	L	T	Q	V	I	.	.	.	.	D	N	L	V	H	I
Template Known Secondary structure										S	S			S																		T	T			G	G	G	T	T	S						S				G	G	G	G	T	T				S					G	G	G					.	.	.	.	T	T
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310					.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	W	Y	D	N	E	Y	G	F	V	T	Q	L	I	R	T	L	E	K	F	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	W	Y	D	N	E	W	G	Y	S	C	R	L	R	D	L	V	I	Y	L	A	E
Template Known Secondary structure							T	T																T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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