Return to main results Retrieve Phyre Job Id

Job DescriptionP33898
Confidence100.00%DateThu Jan 5 11:52:40 GMT 2012
Rank57Aligned Residues308
% Identity19%Templatec2ep5B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:350aa long hypothetical aspartate-semialdehyde PDBTitle: structural study of project id st1242 from sulfolobus tokodaii strain7
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SKVGINGF. GRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKEA
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Template Sequence  IKVSLLGSTGMVGQKMVKMLA. KHPYLELVKVSA. . . . . . . . . . . . SPSKIGK. . . KYKDAVKWIEQGDIPEEVQDLPIV
Template Known Secondary structure  TTTST.T
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Query Sequence  KNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPA. . . GEMKTIVYNVNDDTLDG. . . . . . . . . . NDTIVSV
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Template Sequence  STNYEDHKDVDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKGILVKN
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SSGGGTTT
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Query Sequence  ASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSG. . .
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Template Sequence  PNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGA. . . . . . . . GYNGISFMAIEGNIIPYIKGEEDKIAKELTKLNGKLE
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Query Sequence  . . . . . . . . . KLKGHAQRVPVKTGSVTELVSILGKKVTAEEVNNALKQATTN. . . NESFGYTDEEIVSSDIIGSHFGSV. F
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Template Sequence  NNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKSLPQQKNLPTAPKQPIIVRDEEDRPQPIIDV
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Query Sequence  DATQTEITAVG. . . . DLQLVKTVAWYDN. EYGFVTQLIRTLEKFAKL
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Template Sequence  NAESGMAVTVGRIRHENNVLRLVVLGDNLVRGAAGITILTVEVMKEL
Template Known Secondary structure  TTSTT
TTTTTTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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