Return to main results Retrieve Phyre Job Id

Job DescriptionP33898
Confidence95.48%DateThu Jan 5 11:52:40 GMT 2012
Rank220Aligned Residues98
% Identity20%Templatec1z82A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from2 thermotoga maritima at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  SKVGINGFGRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKEAK
Query Conservation 












 


 


    







       



  

  
     
      
 
 
  
 
     
 
Alig confidence 





























....






..............
























Template Conservation   

 




 

   
  
   
  
    ....
      ..............     
           
       
Template Sequence  XRFFVLGAGSWGTVFAQXLHENGEEVILWA. . . . RRKEIVD. . . . . . . . . . . . . . LINVSHTSPYVEESKITVRATNDLE
Template Known Secondary structure 


STT

....SS..............S
BTTBTT



SS
GG
Template Predicted Secondary structure 






....

..............















Template SS confidence 















































































   3......10.........20.........30.. ....... 40.........50.........60....
 
   82.......90.........100.........110.........120.
Predicted Secondary structure 





















Query SS confidence 







































Query Sequence  NIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISA
Query Conservation   
 
   






 

 
     
  

 



 




Alig confidence 


....
































Template Conservation     ....  
 


 

          
      
  
 
Template Sequence  EIK. . . . KEDILVIAIPVQYIREHLLRLPVKPSXVLNLSK
Template Known Secondary structure  G

....TT
S
GGGTT
SS

S


Template Predicted Secondary structure 
....












Template SS confidence 







































   65.. ..70.........80.........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions