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Job DescriptionP33898
Confidence100.00%DateThu Jan 5 11:52:40 GMT 2012
Rank62Aligned Residues308
% Identity19%Templatec1ys4A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: structure of aspartate-semialdehyde dehydrogenase from2 methanococcus jannaschii
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SKVGINGF. GRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSV. DFTEDSLIVDGKSIAVYAEKE
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Template Sequence  IKVGVLGATGSVGQRFVQLLA. DHPXFELT. . . . . . . . . . . . ALAASERSAGKKYKDACYWFQDRDIPENIKDXVVIPTD
Template Known Secondary structure  TTTST.T
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Query Sequence  AKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPA. . . GEMKTIVYNVNDDTL. . . . . . . . . . DGNDTIVS
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Template Sequence  PKHEEFE. . DVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRXEEDVPLVIPEVNADHLELIEIQREKRGWDGAIIT
Template Known Secondary structure  TTSGGGT..T




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Query Sequence  VASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIG. . . . . . . . . .
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Template Sequence  NPNCSTICAVITLKPIXDKFGLEAVFIATXQAVSGA. . . . . . . . GYNGVPSXAILDNLIPFIKNEEEKXQTESLKLLGTL
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Query Sequence  . . LVIPELSGKLKGHAQRVPVKTGSVTELVSILGKKVTAEEVNNALKQATTN. NESFGYTDEEIVSSDIIGSHFGSVFDA
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Template Sequence  KDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVXDKFDPLKDLNLPTYAKPIVIREEIDRPQPRLDRN
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Query Sequence  TQTE. . . . . . ITAVGDLQLVKTVAWYDN. EYGFVTQLIRTLEKFAK
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Template Sequence  EGNGXSIVVGRIRKDPIFDVKYTALEHNTIRGAAGASVLNAEYFVK
Template Known Secondary structure  GGGGTS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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