Return to main results Retrieve Phyre Job Id

Job DescriptionP33898
Confidence97.31%DateThu Jan 5 11:52:40 GMT 2012
Rank157Aligned Residues90
% Identity12%Templatec1xeaD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of a gfo/idh/moca family oxidoreductase2 from vibrio cholerae
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  SKVGINGFGRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKEAK
Query Conservation 












 


 


    







       



  

  
     
      
 
 
  
 
     
 
Alig confidence 




























.



















........................





Template Conservation 






 
 
    
   
      

 .
           
       ........................      
Template Sequence  LKIAXIGLGDIAQKAYLPVLAQWPDIELV. LCTRNPKVLGTLATRYRVSA. . . . . . . . . . . . . . . . . . . . . . . . TCTDYR
Template Known Secondary structure 


TS
TT.
S
TT


........................SSGG
Template Predicted Secondary structure 







.





........................

Template SS confidence 















































































   3......10.........20.........30. ........40.........50. ......
 
   82.......90.........100.........110........
Predicted Secondary structure 



















Query SS confidence 




































Query Sequence  NIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVL
Query Conservation   
 
   






 

 
     
  

 



 

Alig confidence 


..































Template Conservation   
 ..   



 



   
      

  




 
Template Sequence  DVL. . QYGVDAVXIHAATDVHSTLAAFFLHLGIPTFV
Template Known Secondary structure  GGG..GG

S
S
GGGTTT

Template Predicted Secondary structure  ..










Template SS confidence 




































   58.60 .........70.........80.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions