Job Description P33898 Confidence 97.60% Date Thu Jan 5 11:52:40 GMT 2012 Rank 144 Aligned Residues 158 % Identity 22% Template c1vm6B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: crystal structure of dihydrodipicolinate reductase (tm1520) from2 thermotoga maritima at 2.27 a resolution Resolution 2.27 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		M	S	K	V	G	I	N	G	F	.	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E
Query Conservation											.
Alig confidence											.														.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	M	K	Y	G	I	V	G	Y	S	G	R	M	G	Q	E	I	Q	K	V	F	S	E	.	.	K	G	H	E	L	V	L	K	V	D	V	N	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S							T	T	T	S													.	.	T	T									T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		A	K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	G	N	D	T	.	.	.	.	.	I	V	S	V	A	S	C	T	T	N	C
Query Conservation																																																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																											.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	E	L	D	S	P	D	V	V	I	D	F	S	S	P	E	A	L	P	K	T	V	D	L	C	K	K	Y	R	A	G	L	V	L	G	T	T	A	L	K	E	E	H	.	.	.	.	.	.	.	L	Q	M	L	R	E	L	S	K	E	V	P	V	V	Q	A	Y	N	F	S	I	G	I	N	V
Template Known Secondary structure		.	.	.	.	.	.			S			S						S		G	G	G												T									S						.	.	.	.	.	.	.								T	T	T	S						S
Template Predicted Secondary structure		.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
								38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	M	A	K	A	L	H	D	S	F	G	I	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L	V	I	P	E	L	S	G	K	L	K	G	H	A	Q	R	V	P
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		L	K	R	F	L	S	E	L	V	K	V	L	E	D	W	D	V	E	I	V	E	T	H	.	.	.	.	.	.	.	.	.	.	H	R	F	K	K	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	T	A	I	L	L	E	S	A	L	G	K	.	.	.	S	V	P	I	H	S	L	R	V	G
Template Known Secondary structure													S	T	T	S									.	.	.	.	.	.	.	.	.	.		T	T				S	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T	S	.	.	.										T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.											.	.	130	.	.	.	.														.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.
		235	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	P	G	D
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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