Job Description P33898 Confidence 99.98% Date Thu Jan 5 11:52:40 GMT 2012 Rank 72 Aligned Residues 287 % Identity 15% Template c1vknC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:n-acetyl-gamma-glutamyl-phosphate reductase; PDBTitle: crystal structure of n-acetyl-gamma-glutamyl-phosphate reductase2 (tm1782) from thermotoga maritima at 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		M	S	K	V	G	I	N	G	F	.	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E
Query Conservation											.
Alig confidence											.													.												.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																								.												.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		X	I	R	A	G	I	I	G	A	T	G	Y	T	G	L	E	L	V	R	L	L	K	.	N	H	P	E	A	K	I	T	Y	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	T	Y	A	G	K	K	L	E	E	I	F	P	S	T	.	.	.	.	.	.	.	L	E	N	S	I	L	S	E	F	D
Template Known Secondary structure									S	T	T	S												.			T	T								.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T	S	B						G	G	G	.	.	.	.	.	.	.					B		B
Template Predicted Secondary structure																								.												.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.														.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																				.	.	.	.	.			130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query Sequence		A	K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	K	T	I	.	.	V	Y	N	V	N	D	D	T	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Alig confidence									.	.	.																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation									.	.	.																					.	.
Template Sequence		P	E	K	V	S	K	N	.	.	.	C	D	V	L	F	T	A	L	P	A	G	A	S	Y	D	L	V	R	E	L	.	.	K	G	V	K	I	I	D	L	G	A	D	F	R	F	D	D	P	G	V	Y	R	E	W	Y	G	K	E	L	S	G	Y	E	N	I	K	R	V	Y	G	L	P	E	L	H	R	E	E	I
Template Known Secondary structure									.	.	.		S							S	T	T										.	.		S						S	S	S	T	T	T		S	S													T	T	G	G	G	S
Template Predicted Secondary structure									.	.	.																					.	.
Template SS confidence
		60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.
Predicted Secondary structure																																.	.																																								.	.	.
Query SS confidence																																.	.																																								.	.	.
Query Sequence		D	G	N	D	T	I	V	S	V	A	S	C	T	T	N	C	L	A	P	M	A	K	A	L	H	D	S	F	G	I	.	.	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	.	.	.	T	T	G	A	A	K
Query Conservation																																.	.																																								.	.	.
Alig confidence		.																														.	.															.	.	.	.	.	.	.	.																		.	.	.
Template Conservation		.																																														.	.	.	.	.	.	.	.
Template Sequence		.	K	N	A	Q	V	V	G	N	P	G	C	Y	P	T	S	V	I	L	A	L	A	P	A	L	K	H	N	L	V	D	P	E	T	I	L	V	D	A	K	S	G	V	S	G	A	.	.	.	.	.	.	.	.	E	K	V	D	Y	L	F	S	E	V	N	E	S	L	R	P	Y	N	V	A	K	H	R	H	V	P
Template Known Secondary structure		.	T	T		S																						T	T		S			S										G	G	G		.	.	.	.	.	.	.	.			G	G	G	S					T	T						S	T	T			T
Template Predicted Secondary structure		.																																														.	.	.	.	.	.	.	.
Template SS confidence
			135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																																																						.	.
Query SS confidence													.	.	.																																																						.	.
Query Sequence		A	I	G	L	V	I	P	E	L	S	G	.	.	.	K	L	K	G	H	A	Q	R	V	P	V	K	T	G	S	V	T	E	L	V	S	I	L	G	K	K	V	T	A	E	E	V	N	N	A	L	K	Q	A	T	T	N	N	E	S	F	G	Y	T	D	E	E	I	.	.	V	S	S	D	I	I	G	S	H	F	G
Query Conservation													.	.	.																																																						.	.
Alig confidence													.	.	.																										.	.																											.	.
Template Conservation																																									.	.
Template Sequence		E	X	E	Q	E	L	G	K	I	S	G	K	K	V	N	V	V	F	T	P	H	L	V	P	X	T	R	G	I	L	S	T	I	Y	V	K	T	D	K	.	.	S	L	E	E	I	H	E	A	Y	L	E	F	Y	K	N	E	P	F	V	H	V	L	P	X	G	I	Y	P	S	T	K	W	C	Y	G	S	N	H	V
Template Known Secondary structure												S	S												S	S	S	S											S	S	.	.														T	T		T	T						T	T					G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		S	V	F	D	A	T	Q	T	E	I	T	A	V	G	D	L	Q	L	V	K	T	V	A	W	Y	D	N	E	.	Y	G	F	V	T	Q	L	I	R	T	L	E	K	F
Query Conservation																														.
Alig confidence					.	.	.	.	.	.																				.
Template Conservation					.	.	.	.	.	.
Template Sequence		F	I	G	.	.	.	.	.	.	X	Q	X	E	E	R	T	N	T	L	I	L	X	S	A	I	D	N	L	V	K	G	A	S	G	Q	A	V	Q	N	X	N	I	X
Template Known Secondary structure					.	.	.	.	.	.					T	T	T	T										T	T	T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		287	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions