Job Description P33898 Confidence 100.00% Date Thu Jan 5 11:52:40 GMT 2012 Rank 18 Aligned Residues 326 % Identity 46% Template c1s7cA_ PDB info PDB header:structural genomics, oxidoreductase Chain: A: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase a; PDBTitle: crystal structure of mes buffer bound form of glyceraldehyde 3-2 phosphate dehydrogenase from escherichia coli Resolution 2.04 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A	K
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		I	K	V	G	I	N	G	F	G	R	I	G	R	I	V	F	R	A	A	Q	.	K	R	S	D	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R	D	P	A
Template Known Secondary structure										S											T	.	T		S	S								S	S	S													T	T	T		S		S	S					S	S	S					T	T									S	S	G	G
Template Predicted Secondary structure																						.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E	.	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	G	N	D	T	I	V	S	V	A	S	C	T	T	N	C	L	A	P	M	A	K
Query Conservation																																														.
Alig confidence																																														.																.
Template Conservation																																																														.
Template Sequence		N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	D	N	T	P	M	F	V	K	G	A	N	F	D	K	Y	A	G	.	Q	D	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L	A	K
Template Known Secondary structure		G			G	G	G	G	T		S						S	S	S			S										T	T		S					S	S			S	S	S			B			T	T	T	T	G	G	G				.		S
Template Predicted Secondary structure																																																														.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	H	D	S	F	G	I	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L	V	I	P	E	L	S	G	K	L	K	G	H	A	Q	R	V	P	V	K	T	G	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	T	V	D	G	P	S	H	K	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V	S	V
Template Known Secondary structure																						T	T	S		S	S	S				T	T		S	G	G	G	S		T	T	T																	S	G	G	G	T	T	S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		T	E	L	V	S	I	L	G	K	K	V	T	A	E	E	V	N	N	A	L	K	Q	A	T	T	N	.	.	N	E	S	F	G	Y	T	D	E	E	I	V	S	S	D	I	I	G	S	H	F	G	S	V	F	D	A	T	Q	T	E	I	T	A	V	G	D	L	Q	L	V	K	T	V	A	W	Y	D	N	E	Y	G
Query Conservation																												.	.
Alig confidence																												.	.																																		.	.	.
Template Conservation																																																															.	.	.
Template Sequence		V	D	L	T	V	R	L	E	K	A	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	K	G	V	L	G	Y	T	E	D	D	V	V	S	T	D	F	N	G	E	V	C	T	S	V	F	D	A	K	A	G	I	A	L	.	.	.	N	D	N	F	V	K	L	V	S	W	Y	D	N	E	T	G
Template Known Secondary structure									S	S																	T	T	T	T	T	T						S				G	G	G	G	T	T			S	S					T	T	T					.	.	.		T	T										T	T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	T	Q	L	I	R	T	L	E	K	F	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	N	K	V	L	D	L	I	A	H	I	S	K
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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