Job Description P33898 Confidence 100.00% Date Thu Jan 5 11:52:40 GMT 2012 Rank 9 Aligned Residues 325 % Identity 44% Template c1obfO_ PDB info PDB header:glycolytic pathway Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: the crystal structure of glyceraldehyde 3-phosphate2 dehydrogenase from alcaligenes xylosoxidans at 1.73 resolution. Resolution 1.7 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		S	K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	.	.	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		I	R	V	A	I	N	G	Y	G	R	I	G	R	N	I	L	R	A	H	Y	E	G	G	K	S	H	D	I	E	I	V	A	I	N	D	L	G	D	P	K	T	N	A	H	L	T	R	Y	D	T	A	H	G	K	F	P	G	T	V	S	V	N	G	S	Y	M	V	V	N	G	D	K	I	R	V	D	A	N	R	N
Template Known Secondary structure										S													T	T	S		S	S									S	S													T	T	T				S	S						T	T					T	T									S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		A	K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E	.	.	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	G	N	D	T	I	V	S	V	A	S	C	T	T	N	C	L	A	P
Query Conservation																																																.	.
Alig confidence																																																.	.																							.
Template Conservation																																																																								.
Template Sequence		P	A	Q	L	P	W	G	A	L	K	V	D	V	V	L	E	C	T	G	F	F	T	T	K	E	K	A	G	A	H	I	K	G	G	A	K	K	V	I	I	S	A	P	G	G	A	D	V	D	A	T	V	V	Y	G	V	N	H	G	T	L	K	S	T	D	T	V	I	S	N	.	A	S	T	T	N	C	L	A	P
Template Known Secondary structure		G	G	G	S		T	T	T	T	T		S						S	S	S			S											T		S					S	S				T	T	S	S					T	T	T	S	G	G	G			T	T							.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	A	L	H	D	S	F	G	I	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L	V	I	P	E	L	S	G	K	L	K	G	H	A	Q	R	V	P	V	K	T
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		L	V	K	P	L	N	D	K	L	G	L	Q	D	G	L	M	T	T	V	H	A	Y	T	N	N	Q	V	L	T	D	V	Y	H	.	E	D	L	R	R	A	R	S	A	T	M	S	M	I	P	T	K	T	G	A	A	A	A	V	G	D	V	L	P	E	L	D	G	K	L	N	G	Y	A	I	R	V	P	T	I	N
Template Known Secondary structure										T															T	T	S		S	S					.	S	S	T	T	T	T	S		T	T	T																		G	G	G	T	T	S									S		S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		G	S	V	T	E	L	V	S	I	L	G	K	K	V	T	A	E	E	V	N	N	A	L	K	Q	A	T	T	N	.	.	N	E	S	F	G	Y	T	D	E	E	I	V	S	S	D	I	I	G	S	H	F	G	S	V	F	D	A	T	Q	T	E	I	T	A	V	G	D	L	Q	L	V	K	T	V	A	W	Y	D	N
Query Conservation																															.	.
Alig confidence																															.	.																																		.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		V	S	I	V	D	L	S	F	V	A	K	R	N	T	T	V	E	E	V	N	G	I	L	K	A	A	S	E	G	E	L	K	G	I	L	D	Y	N	T	E	P	L	V	S	V	D	Y	N	H	D	P	A	S	S	T	V	D	A	S	L	T	K	V	S	.	.	.	.	G	R	L	V	K	V	S	S	W	Y	D	N
Template Known Secondary structure												S	S																	T	T	T	T	T	T						S				G	G	G	G	T	T				S					G	G	G					.	.	.	.	T	T										T
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	G	F	V	T	Q	L	I	R	T	L	E	K	F	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	G	F	S	N	R	M	L	D	T	T	V	A	L	M	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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