Job Description P33898 Confidence 91.64% Date Thu Jan 5 11:52:40 GMT 2012 Rank 348 Aligned Residues 100 % Identity 17% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A
Query Conservation
Alig confidence																							.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	R	V	V	V	I	G	A	G	F	V	G	A	S	Y	V	F	A	L	M	.	N	Q	G	I	A	D	E	I	V	L	I	D	A	N	E	S	K	A	I	G	D	A	M	D	F	N	H	G	K	V	F	A	P	K	P	V	D	I	W	D	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S								S												.	T	T	T			S							S	S															G	G	G	T	T								G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.											.	.
Query SS confidence																								.	.	.	.	.	.	.	.											.	.
Query Sequence		K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	.	.	.	.	.	.	.	.	A	E	K	S	Q	A	H	L	D	A	.	.	G	A	K	K	V	L	I	S	A	P
Query Conservation																								.	.	.	.	.	.	.	.											.	.
Alig confidence		.	.	.	.	.																		.	.	.	.	.	.	.	.											.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	D	C	R	D	A	D	L	V	V	I	C	A	G	A	N	D	L	V	D	K	N	I	A	I	F	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V	A	T	N	P
Template Known Secondary structure		.	.	.	.	.	G		S	S		S																													T	T			S							S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions