Job Description P33898 Confidence 100.00% Date Thu Jan 5 11:52:40 GMT 2012 Rank 5 Aligned Residues 326 % Identity 48% Template c1ihxD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of two d-glyceraldehyde-3-phosphate2 dehydrogenase complexes: a case of asymmetry Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	.	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A	K
Query Conservation																																			.
Alig confidence																								.	.										.
Template Conservation																								.	.
Template Sequence		K	I	G	I	N	G	F	G	R	I	G	R	L	V	L	R	T	A	L	E	M	G	.	.	A	Q	V	V	A	V	N	D	P	F	I	A	L	E	Y	M	V	Y	M	F	K	Y	D	S	T	H	G	M	F	K	G	E	V	K	V	E	D	G	A	L	V	V	D	G	K	K	I	T	V	F	N	E	M	K	P	E
Template Known Secondary structure									S											T	T	T	T	.	.									T	T	S													T	T	T					S						S	S					T	T									S	S	G	G
Template Predicted Secondary structure																								.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	G	N	D	T	I	V	S	V	A	S	C	T	T	N	C	L	A	P	M	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	P	W	S	K	A	G	A	E	Y	I	V	E	S	T	G	V	F	T	T	I	E	K	A	S	A	H	F	K	G	G	A	K	K	V	I	I	S	A	P	S	A	D	A	P	M	F	V	C	G	V	N	L	E	K	Y	S	K	D	M	K	V	V	S	N	A	S	C	T	T	N	C	L	A	P	V	A	K	V
Template Known Secondary structure		G							T								S	S	S			S					G	G	G	G	T	T	T		S					S	S			S	S	S		B			T	T	T	S	G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	S	F	G	I	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L	V	I	P	E	L	S	G	K	L	K	G	H	A	Q	R	V	P	V	K	T	G	S	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	E	N	F	E	I	V	E	G	L	M	T	T	V	H	A	V	T	A	T	Q	K	T	V	D	G	P	S	A	K	D	W	R	G	G	R	G	A	A	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	I	P	E	L	D	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V	S	V	V
Template Known Secondary structure																					T	T	S	B	S	S	S				T	T		T	G	G	G	S	B	T	T	T																	S	G	G	G	T	T	S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		E	L	V	S	I	L	G	K	K	V	T	A	E	E	V	N	N	A	L	K	Q	A	T	T	N	.	.	N	E	S	F	G	Y	T	D	E	E	I	V	S	S	D	I	I	G	S	H	F	G	S	V	F	D	A	T	Q	T	E	I	T	A	V	G	D	L	Q	L	V	K	T	V	A	W	Y	D	N	E	Y	G	F
Query Conservation																											.	.
Alig confidence																											.	.																																		.	.	.
Template Conservation																																																														.	.	.
Template Sequence		D	L	T	V	R	L	G	K	E	C	S	Y	D	D	I	K	A	A	M	K	T	A	S	E	G	P	L	Q	G	V	L	G	Y	T	E	D	D	V	V	S	C	D	F	T	G	D	N	R	S	S	I	F	D	A	K	A	G	I	Q	L	.	.	.	S	K	T	F	V	K	V	V	S	W	Y	D	N	E	F	G	Y
Template Known Secondary structure								S	S															T	T	T	T	T	T	T	T						S				G	G	G	G	T	T				S					T	T	T					.	.	.		T	T										T	T
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	Q	L	I	R	T	L	E	K	F	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	R	V	I	D	L	I	K	H	M	Q	K	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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