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Job Description | P33898 | Confidence | 95.17% | Date | Thu Jan 5 11:52:40 GMT 2012 |
Rank | 234 | Aligned Residues | 102 |
% Identity | 20% | Template | c1gv1D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:malate dehydrogenase; |
PDBTitle: structural basis for thermophilic protein stability:2 structures of thermophilic and mesophilic malate3 dehydrogenases
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Resolution | 2.5 Å |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | K | V | G | I | N | G | F | G | R | I | G | R | L | V | L | G | R | L | L | E | V | K | S | N | I | D | V | V | A | I | N | D | L | T | S | P | K | I | L | A | Y | L | L | K | H | D | S | N | Y | G | P | F | P | W | S | V | D | F | T | E | D | S | L | I | V | D | G | K | S | I | A | V | Y | A | E | K | E | A | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | K | I | T | V | I | G | A | G | N | V | G | A | T | T | A | F | R | I | A | D | K | K | L | A | R | E | L | V | L | . |
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L | D | V | V | E | G | I | P | Q | G | K | G | L | D | M | Y | E | T | G | P | V | G | L | F | D | T | K | I | T | G | S | N | D | Y | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
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. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
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. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | I | P | W | K | A | K | G | A | E | I | I | V | E | C | T | G | . |
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F | Y | T | S | A | E | K | S | Q | A | H | L | D | A | . |
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G | A | K | K | V | L | I | S | A | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | T | A | . |
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D | S | D | I | V | I | I | T | A | G | L | L | L | M | K | N | A | G | I | V | K | E | V | T | D | N | I | M | K | H | S | K | N | P | I | I | I | V | V | S | N | P |
Template Known Secondary structure |   |
G | S | T | . | . | . | . | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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66 | . | . | |
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. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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