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Job DescriptionP33898
Confidence100.00%DateThu Jan 5 11:52:40 GMT 2012
Rank24Aligned Residues309
% Identity17%Templatec1b7gO_
PDB info PDB header:oxidoreductaseChain: O: PDB Molecule:protein (glyceraldehyde 3-phosphate dehydrogenase); PDBTitle: glyceraldehyde 3-phosphate dehydrogenase
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50........ .60.........70.........
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Query Sequence  MSKVGINGFGRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSV. DFTEDSLIVDGKSIAVYAEKE
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Template Sequence  MVNVAVNGYGTIGKRVADAII. KQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT. .
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   1........10.........20. ........30.........40.........50.........60.........70.......
 
   80.........90.........100.........110.........120... ......130.........140.........150.......
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Query Sequence  AKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPA. . GEMKTIVYNVNDDTLDGNDTIVSVASCTTNCLAP
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Template Sequence  . . . . . . . . . . SDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEAL. GKKYIRVVSCNTTALLR
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   78.80.........90.........100.........110.........120......... 130.........140......
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  MAKALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSGKLKGHAQRVPVKT
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Template Sequence  TICTVNKVSKVEKVRATIVRRAADQKEVKKGP. . . . . INSLVPDPATVPSHHA. . KDVNSVIRNL. . DIATMAVIAPTTL
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   147..150.........160.........170........ .180.........190.... .....200.... .....210.......
 
   238.240.........250.........260... ......270.........280.........290.........300.........310.
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Query Sequence  GSVTELVSILGKKVTAEEVNNALKQA. . . . . . TTNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITAVGDLQLVKTVA
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Template Sequence  MHMHFINITLKDKVEKKDILSVLENTPRIVLISSKYDAEATAELVEVARD. LKRDRNDIPEVMIFSDSIYVKDDEVMLMY
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   218.220.........230.........240.........250.........260....... ..270.........280.........290......
 
   312.......320.........330...
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Query Sequence  WYDNEYGFVTQLIRTLEKFAKL
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Template Sequence  AVHQESIVVPENIDAIRASMKL
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   297..300.........310........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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