Job Description P33898 Confidence 88.89% Date Thu Jan 5 11:52:40 GMT 2012 Rank 400 Aligned Residues 143 % Identity 22% Template c1a5zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: lactate dehydrogenase from thermotoga maritima (tmldh) Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		S	K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	.	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A
Query Conservation																																		.
Alig confidence																																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	G	I	V	G	L	G	R	V	G	S	S	T	A	F	A	L	L	M	K	G	F	A	R	E	M	V	L	I	D	V	D	K	K	R	A	E	G	D	A	L	D	L	I	H	G	T	P	F	T	R	R	A	N	I	Y	A	G	D	Y	A	D	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S														T			S							S	S															G	G	G	S										G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	G	N	D	T	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	S	D	V	V	I	V	A	A	G	V	P	Q	K	P	G	E	T	R	L	Q	L	L	G	R	N	A	R	V	M	K	E	I	A	R	N	V	S	K	Y	A	P	D	S	I	V	I	V	V	T	N	P	V	D	V	L	T	Y	F	F	L	K	E	S	G	M	D	P	R	K	V	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	T		S												S	S																										T	T							S	S	S													T			T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	V	A	S	C	T	T	N	C	L	A	P	M	A	K	A	L	H	D	S	F	G	I	E
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		G	.	.	.	S	G	T	V	L	D	T	A	R	L	R	T	L	I	A	Q	H	C	G	F	S
Template Known Secondary structure			.	.	.		T	T																T
Template Predicted Secondary structure			.	.	.
Template SS confidence
		162				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions