 |
Job Description | P67603 | Confidence | 13.20% | Date | Thu Jan 5 12:10:42 GMT 2012 |
Rank | 49 | Aligned Residues | 27 |
% Identity | 26% | Template | c1zbe1_ |
PDB info |
PDB header:virus | Chain: 1: PDB Molecule:coat protein vp1; |
PDBTitle: foot-and mouth disease virus serotype a1061
|
Resolution | 3.00 Å |
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | S | H | F | K | T | G | D | V | L | R | V | G | R | F | E | D | D | G | Y | F | C | T | I | E | V | T | A | T | S | T |
Query Conservation |   |
|
|
|
|   |   |   |
|   |   |
|   |
|   |
|   |
|
|   |
|   |
|
|   |
|
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
| . | . | . | . |
|   |   |
|
|
|
| . |   |
|   |   |
Template Sequence |   |
T | H | K | H | G | I | V | G | A | L | L | R | A | A | T | Y | . |
. |
. |
. |
Y | F | S | D | L | E | I | . |
V | V | R | H |
Template Known Secondary structure |   |
B |
| T | T | S |  |  |  |  |  |  |  | T |  |  |  | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
. | . | . | . | . | . | . | |
. | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|