Job Description P76193 Confidence 6.65% Date Thu Jan 5 12:20:20 GMT 2012 Rank 40 Aligned Residues 89 % Identity 13% Template d1qvca_ SCOP info OB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB Resolution 2.20

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	M	N	A	P	D	I	K	A	L	F	S	S	V	R	T	G	T	P	V	K	V	I	N	E	P	V	K	Y	S	V	E	P	N	G	M	R	Y	V	E	V	H	R	P	L	S	A	E	E	Q	Q	N	V	Q	T	M	P	Y	T	L	P	A	G	F	T	Q	F	K	D	N	K	A	V	D	Q	K	L	V	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Sequence		V	V	L	F	G	K	L	A	E	V	A	S	E	Y	L	R	K	G	S	Q	V	Y	I	.	.	.	.	.	.	.	.	.	.	.	E	G	Q	L	R	T	R	K	W	T	D	Q	S	G	Q	D	R	Y	T	T	E	V	V	V	N	V	G	G	T	M	Q	M	L	G	G	R	Q	G	G	.	.	.	.	.	.	.
Template Known Secondary structure						T												T	T						.	.	.	.	.	.	.	.	.	.	.											S	S	S	S											T	T										S				.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	Y	R	R	A	G	Y	P	V	S	V	S	S	G	A	T	P	A	A	S	N	A	P	S	V	E	S	A	Q	N	G	E	P	E	Q	G	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	A	P	A	G	G	N	I	G	G	G	Q	P	Q	G	G	W	G	Q	P	Q	Q	P	Q	G	G	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	S				S	S		S	S	T	T		S	S	S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions