Job Description P76193 Confidence 20.80% Date Thu Jan 5 12:20:20 GMT 2012 Rank 21 Aligned Residues 60 % Identity 17% Template c1bmv2_ PDB info PDB header:virus/rna Chain: 2: PDB Molecule:protein (icosahedral virus - b and c domain); PDBTitle: protein-rna interactions in an icosahedral virus at 3.02 angstroms resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																									.
Query SS confidence										.	.	.	.																																									.
Query Sequence		L	E	A	N	N	T	I	A	.	.	.	.	P	V	P	K	P	G	T	T	I	T	I	P	S	Q	L	L	L	P	D	A	P	R	Q	G	I	I	V	N	L	A	E	L	R	L	Y	Y	Y	P	P	G	.	E	N	I	V	Q	V	Y	P	I	G	I	G	L	Q
Query Conservation										.	.	.	.																																									.
Alig confidence										.	.	.	.																								.												.					.
Template Conservation																																					.												.
Template Sequence		W	T	A	T	P	M	Q	D	V	Q	V	T	I	D	W	F	I	S	S	Q	E	C	V	P	R	T	Y	C	V	L	N	P	Q	N	P	.	F	V	L	N	R	W	M	G	K	L	T	.	F	P	Q	G	T	S	R	S	V	K	R	M	P	L	S	I	G	G	G
Template Known Secondary structure			S	S			S	S												S	S									S	S	S			T	T	.												.			S	B	S									S			S	S
Template Predicted Secondary structure																																					.												.
Template SS confidence
		3156	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.	3180	.	.	.	.	.	.	.	.	.	3190		.	.	.	.	.	.	.	.	.	3200	.		.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions