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Job Description | P0AES0 | Confidence | 75.27% | Date | Thu Jan 5 11:24:04 GMT 2012 |
Rank | 50 | Aligned Residues | 99 |
% Identity | 10% | Template | c2zdqA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:d-alanine--d-alanine ligase; |
PDBTitle: crystal structure of d-alanine:d-alanine ligase with atp2 and d-alanine:d-alanine from thermus thermophius hb8
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Resolution | 2.30 Å |
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474 | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | |
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. | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | L | I | D | V | L | L | R | P | E | V | L | V | F | E | P | L | W | T | V | I | P | . |
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G | N | K | A | I | L | P | I | L | W | S | L | F | . |
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P | H | H | R | Y | L | L | D | T | D | F | T | V | N | D | E | L | V | K | T | G | Y | A | V | K | P | I | A | G | R | C | G | S | N | I | D | L | V | S | H | H |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | V | Q | G | F | L | E | L | L | G | K | P | Y | V | G | A | G | V | A | A | S | A | L | C | M | D | K | D | L | S | K | R | V | L | A | Q | A | G | V | P | V | V | P | W | V | A | V | R | K | G | E | P | P | V | V | P | F | D | P | P | F | F | V | K | P | A | N | T | G | S | S | V | G | I | S | R | V | E | R | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
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550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | E | V | L | D | K | T | S | G | K | F | A | E | Q | . |
K | N | I | Y | Q | Q | L | W | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | D | L | E | A | A | L | A | L | A | F | R | Y | D | E | K | A | V | V | E | K | A | L | S |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |  | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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