Job Description P0AES0 Confidence 45.50% Date Thu Jan 5 11:24:04 GMT 2012 Rank 80 Aligned Residues 46 % Identity 24% Template c2p1nD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																	.	.	.
Query SS confidence																						.	.	.	.	.																	.	.	.
Query Sequence		P	Y	H	Y	Y	T	I	T	E	S	A	E	Q	E	L	I	K	A	T	N	.	.	.	.	.	E	L	H	L	M	Y	L	H	A	T	D	K	V	L	K	D	.	.	.	D	N	L	L	A	L	F	D	I	P
Query Conservation																						.	.	.	.	.																	.	.	.
Alig confidence																						.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		D	A	D	F	M	K	I	D	Q	A	T	L	F	E	L	I	L	A	A	N	Y	L	N	I	K	N	L	L	D	L	T	C	Q	T	V	A	D	M	I	K	G	K	T	P	E	E	I	R	T	T	F	N	I	K
Template Known Secondary structure		T	T	T	T	T																		T																	T	T										S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions