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Job DescriptionP0AES0
Confidence100.00%DateThu Jan 5 11:24:04 GMT 2012
Rank1Aligned Residues589
% Identity100%Templatec2ioaA_
PDB info PDB header:ligase, hydrolaseChain: A: PDB Molecule:bifunctional glutathionylspermidine PDBTitle: e. coli bifunctional glutathionylspermidine2 synthetase/amidase incomplex with mg2+ and adp and3 phosphinate inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  APFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRF
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Template Sequence  APFGTLLGYAPGGVAIYSSDYV. . . . . . . . . . . . FRSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRF
Template Known Secondary structure 

TT
GGG




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TTTT
S



SSGGGGGG

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   10.........20.........30. ........40.........50.........60.........70.......
 
   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  LREVVNDNILPLQAFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQWTRELEMVV
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Template Sequence  LREVVNDNILPLQAFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQWTRELEMVV
Template Known Secondary structure  TTTT
TTBSS


TT

SBTTBTTT

SS
SSS

S


TT


S
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   170.........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  ENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDP
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Template Sequence  ENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDP
Template Known Secondary structure  SSS

SSTT



S

TT







GGGG




SSTTSS

S
SSS
S
SSS
T
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   250.........260.........270.........280.........290.........300.........310.........320.........
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Query Sequence  YHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVY
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Template Sequence  YHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVY
Template Known Secondary structure  TT
GGG


GGGTT


TT
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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  EYNADSASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEENYHAQFMEQALHQAGFE
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Template Sequence  EYNADSASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEENYHAQFMEQALHQAGFE
Template Known Secondary structure 
SS


T

SS
B
TTTTTS


S
S
TT
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   330.........340.........350.........360.........370.........380.........390.........400.........
 
   410.........420.........430.........440.........450.........460.........470.........480.........
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Query Sequence  TRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQIREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEP
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Template Sequence  TRILRGLDELGWQ. . . . LIDGEGRLVNCVWKTWAWETAFDQIREV. . . . FAAVPIRTGHPQNEVRLIDVLLRPEVLVFEP
Template Known Secondary structure  SSTT
B

....
B
TTS
B


S


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S



S

TT



STSTT
S
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   490.........500.........510.........520.........530.........540.........550.........560.........
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Query Sequence  LWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQ
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Template Sequence  LWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQ
Template Known Secondary structure  GGGGTTTSGGGSTT
TT


SS


TT

TT
S

TTS



TTTTS
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   490.........500.........510.........520.........530.........540.........550.........560.........
 
   570.........580.........590.........600.........610........
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Query Sequence  LWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
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Template Sequence  LWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
Template Known Secondary structure 




TTTTSSSS

TT


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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