Job Description P0AES0 Confidence 96.66% Date Thu Jan 5 11:24:04 GMT 2012 Rank 16 Aligned Residues 129 % Identity 14% Template c1i7nA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:synapsin ii; PDBTitle: crystal structure analysis of the c domain of synapsin ii2 from rat brain Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.		.	.	.	.	.	.	500	.	.	.	.	.	.										.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																					.														.	.	.	.	.	.	.	.	.
Query SS confidence																					.														.	.	.	.	.	.	.	.	.
Query Sequence		L	I	D	V	L	L	R	P	E	V	L	V	F	E	P	L	W	T	V	.	I	P	G	N	K	A	I	L	P	I	L	W	S	.	.	.	.	.	.	.	.	.	L	F	P	H	H	R	Y	L	L	D	T	D	F	T	V	N	D	E	L	V	K	T	G	Y	A	V	K	P	I	A	G	R	C	G	S	N	I	D
Query Conservation																					.														.	.	.	.	.	.	.	.	.
Alig confidence																					.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	I	G	M	Q	Y	A	G	L	P	S	I	N	S	L	E	S	I	Y	N	F	C	D	K	P	W	V	F	A	Q	M	V	A	I	F	K	T	L	G	G	E	K	F	P	L	I	E	Q	T	Y	Y	P	N	H	R	E	M	L	T	L	P	T	F	P	V	V	V	K	I	G	H	A	H	S	G	M	G	K	V
Template Known Secondary structure									T	T					S								T	S	S																	T	T	T	S		B							S	S	G	G	G	G	S	S				S	S						S	S		S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.		.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	V	S	H	H	E	E	V	L	D	K	T	S	G	K	F	A	E	Q	K	N	I	Y	.	Q	Q	L	W	C	L	P	K	V	D	G	K	Y	I	Q	V	C	T	F	T	V	G	G	N	Y	G	G	T	C	L	R	G	D	E	S	L	V	I	K	K	E	S
Query Conservation																									.
Alig confidence																									.						.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		K	V	E	N	H	Y	D	F	Q	D	I	A	S	V	V	A	L	T	Q	T	Y	A	T	A	E	P	F	I	D	.	.	.	.	.	.	A	K	Y	D	I	R	V	Q	K	I	G	N	N	Y	K	A	Y	M	R	T	S	I	S	G	N	W	K	T	N	T	G
Template Known Secondary structure					S															T											.	.	.	.	.	.											T	T									S	S		T	T	T	S		S
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310							.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions