Job Description P77570 Confidence 100.00% Date Thu Jan 5 12:30:41 GMT 2012 Rank 2 Aligned Residues 346 % Identity 49% Template c3qbwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate Resolution 2.23 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	I	G	V	M	S	G	T	S	L	D	G	V	D	V	V	L	A	T	I	D	E	H	R	V	A	Q	L	A	S	L	S	W	P	I	P	V	S	L	K	Q	A	V	L	D	I	C	Q	G	Q	Q	L	T	L	S	Q	F	G	Q	L	D	T	Q	L	G	Q	L	F	A	D	A	V	N	A	L	L	K	E	Q
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		R	Y	L	G	L	M	S	G	T	S	L	D	G	M	D	I	V	L	I	E	Q	G	D	.	R	T	T	L	L	A	S	H	Y	L	P	M	P	A	G	L	R	E	D	I	L	A	L	C	V	P	G	P	D	E	I	A	R	A	A	E	V	E	Q	R	W	V	A	L	A	A	Q	G	V	R	E	L	L	L	Q	Q
Template Known Secondary structure										T	T		S										S	S	.	S																							S	S			T	T																											T
Template Predicted Secondary structure																									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	Q	A	R	D	I	V	A	I	G	C	H	G	Q	T	V	W	H	E	P	T	G	V	A	P	H	T	L	Q	I	G	D	N	N	Q	I	V	A	R	T	G	I	T	V	V	G	D	F	R	R	R	D	I	A	L	G	G	Q	G	A	P	L	V	P	A	F	H	H	A	L	L	A	H	P	T	E	R	R	M
Query Conservation
Alig confidence																								.	.																																																		.	.	.	.	.
Template Conservation																								.	.																																																		.	.	.	.	.
Template Sequence		Q	M	S	P	D	E	V	R	A	I	G	S	H	G	Q	T	I	R	H	E	P	A	.	.	R	H	F	T	V	Q	I	G	N	P	A	L	L	A	E	L	T	G	I	D	V	V	A	D	F	R	R	R	D	V	A	A	G	G	Q	G	A	P	L	V	P	A	F	H	Q	A	L	F	S	.	.	.	.	.	R	A
Template Known Secondary structure		T			G	G	G															G	G	.	.	G	T																S	S													T	T							T										.	.	.	.	.
Template Predicted Secondary structure																								.	.																																																		.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	N	I	G	G	I	A	N	L	S	L	L	I	P	G	Q	P	V	G	G	Y	D	T	G	P	G	N	M	L	M	D	A	W	I	W	R	Q	A	G	K	P	Y	D	K	D	A	E	W	A	R	A	G	K	V	I	L	P	L	L	Q	N	M	L	S	D	P	Y	F	S	Q	P	A	P	K	S	T	G	R	E
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		V	L	N	I	G	G	F	S	N	V	S	L	L	R	.	.	.	.	.	.	G	F	D	C	G	P	G	N	V	L	M	D	A	W	I	H	H	Q	R	G	E	H	F	D	R	D	G	A	W	A	A	S	G	Q	V	N	H	A	L	L	A	S	L	L	A	D	E	F	F	A	A	R	G	P	K	S	T	G	R	E
Template Known Secondary structure						S	S									.	.	.	.	.	.							S	S												S		S	S		G	G	G					T	S												T	S							S	S					T	T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	N	Y	G	W	L	E	R	H	L	R	H	F	P	G	V	D	P	R	D	V	Q	A	T	L	A	E	L	T	A	V	T	I	S	E	Q	V	L	L	S	G	G	C	E	R	L	M	V	C	G	G	G	S	R	N	P	L	L	M	A	R	L	A	A	L	L	P	G	T	E	V	T	T	T	D	A	V	G	I
Query Conservation
Alig confidence																																													.	.
Template Conservation																																													.	.
Template Sequence		R	F	N	L	P	W	L	Q	E	H	L	A	R	H	P	A	L	P	A	A	D	I	Q	A	T	L	L	E	L	S	A	R	S	I	S	E	S	L	L	D	A	Q	P	.	.	D	V	L	V	C	G	G	G	A	F	N	T	A	L	M	K	R	L	A	M	L	M	P	E	A	R	V	A	S	T	D	E	Y	G	I
Template Known Secondary structure		T	S	S									T	S	S																														.	.						S	G	G	G	G													T	T	S					G	G	G	G	T	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	D	D	M	E	A	L	A	F	A	W	L	A	W	R	T	L	A	G	L	P	G	N	L	P	S	V	T	G	A	S	Q	E	T	V	L	G	A	I	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	A	W	M	E	G	M	A	F	A	W	L	A	H	R	F	L	E	R	L	P	G	N	C	P	D	V	T	G	A	L	G	P	R	T	L	G	A	L	Y	P
Template Known Secondary structure			G	G	G															T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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