 |
Job Description | P77570 | Confidence | 66.72% | Date | Thu Jan 5 12:30:41 GMT 2012 |
Rank | 78 | Aligned Residues | 141 |
% Identity | 12% | Template | c3p4iA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:acetate kinase; |
PDBTitle: crystal structure of acetate kinase from mycobacterium avium
|
Resolution | 2.35 Å |
|
 |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | R | R | M | V | L | N | I | G | G | I | A | N | L | S | L | L | I | P | G | Q | P | V | G | G | Y | D | T | G | P | G | N | M | L | M | D | A | W | I | W | . |
. |
R | Q | A | G | K | P | Y | D | K | D | A | E | W | A | R | A | G | K | V | I | L | P | L | L | Q | N | M | L | S | D | P | Y | F | S | Q | P | A |
Query Conservation |   |
  |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   | . | . |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|
|
|   |
|
|
|   |
|   |
|
|   |
|
|   |   |
| . | . | . |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   | . | . | . | . | . | . | . |
Template Sequence |   |
G | L | K | Q | I | V | L | H | L | G | N | G | C | S | A | S | A | I | A | G | T | . |
. |
. |
R | P | L | D | T | S | M | G | L | T | P | L | E | G | L | V | M | G | T | R | S | G | D | I | D | P | S | V | V | S | Y | L | C | H | T | A | G | M | G | V | D | D | V | E | S | M | L | N | H | . |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
G |
|  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  | T | T | . | . | . |  |  |  |  |  | S |
|
| S | S | T | T | S | S | S |
|
| S | S |
|
|
| S |
|
| T |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
|
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
|
|
|
|
|
|
  |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | K | S | T | G | R | E | Y | F | N | Y | G | W | L | E | R | H | L | R | H | F | P | G | V | D | P | R | . |
. |
D | V | Q | A | T | L | A | E | L | T | A | V | T | I | S | E | Q | V | L | L | S | G | G | C | E | R | L | M | V | C | G | G | . |
G | S | R | N | P | L | L | M | A | R | L | A | A | L | L |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   | . | . |
|   |   |
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
| . |
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |
|
|
|   |
|   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |
|   |
|   |
|   |
|   |
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
Template Sequence |   |
. |
R | S | G | V | V | G | L | S | G | V | R | D | F | R | R | L | R | E | L | I | E | S | G | D | G | A | A | Q | L | A | Y | S | V | F | T | H | R | L | R | K | Y | I | G | A | Y | L | A | V | L | G | H | T | D | V | I | S | F | T | A | G | I | G | E | N | D | A | A | V | R | R | D | A | V | S | G | M |
Template Known Secondary structure |   |
. | S |
|  |  |  |  |  |  | S |
|
|
| T |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
. |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|