Return to main results Retrieve Phyre Job Id

Job DescriptionP77570
Confidence97.70%DateThu Jan 5 12:30:41 GMT 2012
Rank7Aligned Residues178
% Identity17%Templatec3i8bA_
PDB info PDB header:transferaseChain: A: PDB Molecule:xylulose kinase; PDBTitle: the crystal structure of xylulose kinase from2 bifidobacterium adolescentis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   169170.........180.........190.........200.........210.........220.........230.... .....240.....
Predicted Secondary structure 

























...







Query SS confidence 

































































. . .










Query Sequence  GGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYFS. . . QPAPKSTGREY
Query Conservation 






 
     
 







 


       
  

  
  
  
 
   

  

  


 ...  







 
Alig confidence 

























..
























...









...










Template Conservation                        
   .. 
                       ...  
   
   


 
         
Template Sequence  GAVSGFADCTGHYLPLACTINGSRIL. . DAGRAALGVDYDELAKLAFASKPGA. . . NGITLVPYFDGERTPNRPNATATF
Template Known Secondary structure  S
S
SSSSS
ST..T

S
TTG...GG


TT
BTTTTBTT


Template Predicted Secondary structure 





..








...
















Template SS confidence 















































































   311........320.........330...... ...340.........350.........360. ........370.........380.....
 
   246...250.........260.........270.........280.. .......290.........300.........310.........320.
Predicted Secondary structure 






....
















Query SS confidence 




































. . . .






































Query Sequence  FNYGWLERHLRHFPGVDPRDVQATLAELTAVTISEQV. . . . LLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDA
Query Conservation 
    
   
     

  
  



  

 

    ....        
 
 



 
  

  
   
    
   
 
Alig confidence 

........


























....




























.







.
Template Conservation    ........          
 







             
     
   

 
 
    
  



.
 

    .
Template Sequence  SG. . . . . . . . XTLANTTRENLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSIL. GXDVTRPA.
Template Known Secondary structure  S........

TTT
STT



SGGGG
.TS

.
Template Predicted Secondary structure  ........


















.


.
Template SS confidence 















































































   386. ..390.........400.........410.........420.........430.........440....... ..450.....
 
   322.......330.........340.........350.........360.........
Predicted Secondary structure 



























Query SS confidence 















































Query Sequence  VGISGDDMEALAFAWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP
Query Conservation   

     

 


 

   
 
    

 



    


 
 
  
Alig confidence  ....





















....

















Template Conservation  ....  
  
 


  

   
    ....               
  
Template Sequence  . . . . TDEYVAIGAARQAAWVLSGETE. . . . PPAWQLTIDGVETGEPTE
Template Known Secondary structure  ....




SS....











Template Predicted Secondary structure  ....








....







Template SS confidence 















































   456...460.........470....... ..480.........490.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions