Job Description P77570 Confidence 24.00% Date Thu Jan 5 12:30:41 GMT 2012 Rank 202 Aligned Residues 214 % Identity 13% Template c3htvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:d-allose kinase; PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution Resolution 1.95 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.																				.
Query SS confidence																														.	.	.	.	.																				.
Query Sequence		Q	L	F	A	D	A	V	N	A	L	L	K	E	Q	N	L	Q	A	R	D	I	V	A	I	G	C	H	G	.	.	.	.	.	Q	T	V	W	H	E	P	T	G	V	A	P	H	T	L	Q	I	G	D	.	N	N	Q	I	V	A	R	T	G	I	T	V	V	G	D	F	R	R	R	D	I	A	L	G	G	Q	G
Query Conservation																														.	.	.	.	.																				.
Alig confidence																							.							.	.	.	.	.																				.																.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	I	G	E	X	I	D	E	Q	L	R	R	F	N	A	R	C	H	G	L	.	V	X	G	F	P	A	L	V	S	K	D	K	R	T	I	I	S	T	P	N	L	P	L	T	A	A	D	L	Y	D	L	A	D	K	L	E	N	T	L	N	C	P	V	E	F	S	.	.	.	.	.	.	.	.	.	.	R	D
Template Known Secondary structure																T							.					S	S		B		T	T	S	S		B		S			S	S	S							T	T										T	S						.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.											.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	L	V	P	A	F	H	H	A	L	L	A	H	P	T	E	R	R	M	V	L	N	I	G	G	I	A	N	L	S	L	L	I	P	G	Q	P	V	G	G	Y	D	T	G	P	G	N	M	L	M	D	A	W	I	W	R	Q	A	G	K	P	Y	D	K	D	A	E	W	A	R	A	G	K	V	I	L	P	L	L
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	L	Q	L	S	W	D	V	V	E	N	R	L	T	Q	Q	L	V	L	A	A	Y	L	G	T	G	X	G	F	A	V	W	X	N	G	A	P	W	T	G	A	H	G	V	A	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	N	C	S	G	X	A	L
Template Known Secondary structure													T	T		T	T	S								S	S	S								T	T						S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																								.	.	.	.	.	.	170	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		Q	N	M	L	S	D	P	Y	F	S	Q	P	A	P	K	S	T	G	R	E	Y	F	N	Y	G	W	L	E	R	H	L	R	H	F	P	G	V	D	P	R	D	V	Q	A	T	L	A	E	L	T	A	V	T	I	S	E	Q	V	L	L	S	G	G	C	E	R	L	M	V	C	G	G	G	S	R	N	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.	.	.
Template Conservation								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		R	R	W	Y	E	Q	.	.	.	.	.	Q	P	R	N	Y	P	L	R	D	L	F	V	.	.	.	.	.	.	.	.	.	.	.	.	H	A	E	N	A	P	F	V	Q	S	L	L	E	N	A	A	R	A	I	A	.	T	S	I	N	L	F	D	P	D	A	V	I	L	G	G	G	V	X	D	X	P	A	F	P
Template Known Secondary structure						T	T	.	.	.	.	.	S			S	S		G	G	G				.	.	.	.	.	.	.	.	.	.	.	.			T	T																	.									S							T	T	T	T	S	T	T
Template Predicted Secondary structure								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		194	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.													.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
			301	.	.	.	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.														.	.	.	.	.
Query SS confidence		.														.	.	.	.	.
Query Sequence		.	P	L	L	M	A	R	L	A	A	L	L	P	G	.	.	.	.	.	T	E	V	T	T	T	D	A	V	G	I	S	G	D	D	M	E	A	L	A	F	A	W
Query Conservation		.														.	.	.	.	.
Alig confidence		.														.	.	.	.	.
Template Conservation
Template Sequence		R	E	T	L	V	A	X	T	Q	K	Y	L	R	R	P	L	P	H	Q	V	V	R	F	I	A	A	S	S	S	D	F	N	G	A	Q	G	A	A	I	L	A	H
Template Known Secondary structure												T	S		T	T	T	T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions