Job Description P77570 Confidence 55.35% Date Thu Jan 5 12:30:41 GMT 2012 Rank 103 Aligned Residues 262 % Identity 13% Template c3eo3B_ PDB info PDB header:isomerase, transferase Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein Resolution 2.84 Å

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		5	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	F	I	G	V	.	M	S	G	T	S	L	D	G	V	D	V	V	L	A	T	I	D	E	H	R	V	A	Q	L	A	S	L	S	W	P	I	P	V	S	L	K	Q	A	V	L	D	I	C	Q	G	Q	Q	L	T	L	S	Q	F	G	Q	L	D	T	Q	L	G	Q	L	F	A	D	A	V	N	A	L	L	K	E
Query Conservation							.
Alig confidence							.						.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	L	A	V	D	L	G	G	T	N	.	.	.	L	R	V	A	I	V	S	M	K	G	E	I	V	K	K	Y	T	Q	F	N	P	K	T	Y	E	E	R	I	N	L	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	M	C	V	E	A	A	A	E
Template Known Secondary structure										S	S	S	.	.	.								T	T													S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450																										.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		Q	N	L	Q	A	R	D	I	V	A	I	G	C	H	G	Q	T	V	W	H	E	P	T	G	V	A	P	H	T	L	Q	I	G	D	N	N	Q	I	V	A	R	T	G	I	T	V	.	.	V	G	D	F	R	R	R	D	I	A	L	G	G	Q	G	A	P	L	V	P	A	F	H	H	A	L	L	A	H	P	T	E
Query Conservation																																																.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	K	L	N	C	R	I	L	G	V	G	I	S	T	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	P	L	S	D	T	L	H	L	P	V	W	V	D	N	D	G	N	C	A	A	L	A	E	R	K	F	G	Q	.	.	.	.	.	.	.	.	.	.	.	G	K	G	L	E
Template Known Secondary structure					T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S																		T	S	T	.	.	.	.	.	.	.	.	.	.	.	T	T	T		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.																		.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.												.	.	.	510	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.								.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		R	R	M	V	L	N	I	G	G	I	A	N	L	S	L	L	I	P	G	Q	P	V	G	G	Y	D	T	G	P	G	N	M	L	M	D	A	W	I	W	R	Q	A	G	K	P	Y	D	K	D	A	E	W	A	R	A	G	K	.	.	.	.	.	.	.	V	I	L	P	L	L	Q	N	M	L	S	D	P	Y	F	S
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		N	F	V	T	L	I	T	G	T	G	I	G	G	G	I	I	H	Q	H	E	L	I	H	G	S	S	F	C	A	A	.	.	.	.	.	.	.	.	.	E	L	G	H	L	V	V	S	L	D	G	P	D	C	S	C	G	S	H	G	C	I	E	A	Y	A	S	G	M	A	L	Q	R	E	A	K	K	L	H	D	E
Template Known Secondary structure		S							S	S	S								T	T						T	T	S				.	.	.	.	.	.	.	.	.		G	G	G		B			S	S			B		T	T	S		B	S	B						S														T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.										.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		Q	P	A	P	K	S	T	G	R	E	Y	F	N	Y	G	W	L	E	R	H	L	R	H	F	P	G	V	D	P	R	D	V	Q	A	T	L	A	E	L	T	A	V	T	I	S	E	Q	V	L	L	S	G	G	C	E	R	L	M	V	C	G	G	G	S	R	N	.	.	P	L	L	M	A	R	L	A	A	L	L	P
Query Conservation																																																																				.	.
Alig confidence																				.	.																																		.													.	.
Template Conservation																				.	.																																		.
Template Sequence		D	L	L	L	V	E	G	M	S	A	V	G	A	L	H	L	I	Q	.	.	A	A	K	L	G	N	A	K	A	Q	S	I	L	R	T	A	G	T	A	L	G	L	G	V	V	N	I	L	H	T	M	N	P	.	S	L	V	I	L	S	G	V	L	A	S	H	Y	I	H	I	V	K	D	V	I	R	Q	Q	A	L
Template Known Secondary structure		T		S			S	S												.	.				T	T																													.	S						S	T	T																S
Template Predicted Secondary structure																				.	.																																		.
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.			.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.		.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
						313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	T	E	V	T	T	T	D	A	V	G	I	S	G	D	D	M	E	A	L	A	F	A	W
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.									.			.
Template Conservation														.			.
Template Sequence		S	S	V	Q	D	V	D	V	V	V	S	D	.	L	V	.	D	P	A	L	L	G	A	A	S	M	V	L
Template Known Secondary structure		G	G	G	T	T								.		S	.	S
Template Predicted Secondary structure														.			.
Template SS confidence
		689	690	.	.	.	.	.	.	.	.	.	700		.	.		.	.	.	.	.	.	.	710	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions