Job Description P77570 Confidence 80.05% Date Thu Jan 5 12:30:41 GMT 2012 Rank 59 Aligned Residues 218 % Identity 10% Template c1z6rC_ PDB info PDB header:transcription Chain: C: PDB Molecule:mlc protein; PDBTitle: crystal structure of mlc from escherichia coli Resolution 2.70 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		Q	L	F	A	D	A	V	N	A	L	L	K	E	Q	N	L	Q	A	R	D	I	V	A	I	G	C	.	.	.	.	.	.	.	.	H	G	Q	T	V	W	H	E	P	T	G	V	A	P	H	T	L	Q	I	G	D	N	N	Q	I	V	A	R	T	G	I	T	V	V	G	D	F	R	R	R	D	I	A	L	G	G
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.											.	.																																		.
Template Conservation																																														.	.																																		.
Template Sequence		D	R	I	I	S	H	I	D	Q	F	F	I	R	H	Q	K	K	L	E	R	L	T	S	I	A	I	T	L	P	G	I	I	D	T	E	N	G	I	V	H	R	X	P	F	.	.	Y	E	D	V	K	E	X	P	L	G	E	A	L	E	Q	H	T	G	V	P	V	Y	I	Q	H	D	I	S	A	W	T	X	A	.
Template Known Secondary structure															T	T	T	T												S	S				T	T	T	T						S	S	.	.		T	T		S	S	B												S															.
Template Predicted Secondary structure																																														.	.																																		.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Q	G	A	P	L	V	P	A	F	H	H	A	L	L	A	H	P	T	E	R	R	M	V	L	N	I	G	G	I	A	N	L	S	L	L	I	P	G	Q	P	V	G	G	Y	D	T	G	P	G	N	M	L	M	D	A	W	I	W	R	Q	A	G	K	P	Y	D	K	D	A	E	W	A	R	A	G	K	V	I	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.																			.	.
Template Conservation		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	A	L	F	G	A	S	R	G	A	R	D	V	I	Q	V	V	I	D	H	N	V	G	A	G	V	I	T	D	G	H	L	L	H	A	G	S	S	S	L	V	E	I	.	.	.	.	.	.	.	.	.	G	H	T	Q	V	D	P	Y	G	K	R	C	Y	C	G	N	H	G	C	L
Template Known Secondary structure		.	.	.	.	.	.	.	.				T	S	T	T	T	T		S	S							S	S	S								T	T			T	T	T	T	S	S			B		G	.	.	.	.	.	.	.	.	.	G	G	S	B	S		T	T	S		B		T	T	S	S	B	S	B	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template SS confidence
										203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
							221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	P	L	L	Q	N	M	L	S	D	P	Y	F	S	Q	P	A	P	K	S	T	G	R	E	Y	F	N	Y	G	W	L	E	R	H	L	R	H	F	P	G	V	D	P	R	D	V	Q	A	T	L	A	E	L	T	A	V	T	I	S	E	Q	V	L	L	S	G	G	C	E	R	L	M	V	C	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																									.	.																								.
Template Conservation																																															.	.																								.
Template Sequence		E	T	I	A	S	V	D	S	I	L	E	L	A	Q	L	R	L	N	Q	S	X	S	S	X	L	H	G	Q	P	L	T	V	D	S	L	C	Q	A	A	L	R	G	D	L	L	.	.	A	K	D	I	I	T	G	V	G	A	H	V	G	R	I	L	A	I	X	V	N	L	F	.	N	P	Q	K	I	L	I	G	S
Template Known Secondary structure						S														T		S	S		G	G	G	G	S														T				.	.																								.			S						S
Template Predicted Secondary structure																																															.	.																								.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.
		296	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	G	S	.	R	N	P	L	L	M	A	R	L	A	A	L	L
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		P	L	S	K	A	A	D	I	L	F	P	V	I	S	D	S	I
Template Known Secondary structure		G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions