 |
Job Description | P77570 | Confidence | 96.51% | Date | Thu Jan 5 12:30:41 GMT 2012 |
Rank | 25 | Aligned Residues | 100 |
% Identity | 22% | Template | c1xupO_ |
PDB info |
PDB header:transferase | Chain: O: PDB Molecule:glycerol kinase; |
PDBTitle: enterococcus casseliflavus glycerol kinase complexed with glycerol
|
Resolution | 2.75 Å |
|
 |
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | D | P | R | D | V | Q | A | T | L | A | E | L | T | A | V | T | I | S | E | Q | V | L | L | . |
. |
. |
. |
. |
S | G | G | C | E | R | L | M | V | C | G | G | G | S | R | N | P | L | L | M | A | R | L | A | A | L | L | P | G | T | E | V | T | T | T | D | A | V | G | I | S | G | D | D | M | E | A | L | A | F |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |
|
|   |
|
|
|   | . |
|   |
|
|   |   |   |   |   | . | . | . | . | . |   |
|   |   |
|
|
|
|
Template Sequence |   |
G | T | T | K | E | D | F | V | R | A | T | L | Q | A | V | A | Y | Q | S | K | D | V | I | D | T | M | K | K | D | S | G | I | D | I | P | L | L | K | V | D | G | G | A | A | K | N | D | L | L | M | Q | F | Q | A | D | I | L | . |
D | I | D | V | Q | R | A | A | N | . |
. |
. |
. |
. |
L | E | T | T | A | L | G | A |
Template Known Secondary structure |   |
T |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| S |  |  |  |
|
| T | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  | . | T | S |
|  |  |  |
| S |
| . | . | . | . | . | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
371 | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | |
. | . | 430 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 440 | . | . | . | . |
  |
  |   |
335 | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | W | L | A | W | R | T | L | A | G | L | P | G | N | L | P | S | V | T | G | A | S | Q | E | T | V | L | G | A | I | F | P | A | N | P |
Query Conservation |   |
|   |
|
|   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|
|
|   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
A | Y | L | A | G | L | A | V | . |
. |
. |
. |
G | F | W | K | D | L | D | E | L | K | S | M | A | E | E | G | Q | M | F | T | P | E | M |
Template Known Secondary structure |   |
 |  | T | T | T | T | T | T | . | . | . | . | T | S | S |
|
| S | T | T | G | G | G | S |
|
|
|
|
| B |
|
|
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
445 | . | . | . | . | 450 | . | . | |
|
|
|
. | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|