Job Description P77570 Confidence 96.76% Date Thu Jan 5 12:30:41 GMT 2012 Rank 23 Aligned Residues 165 % Identity 12% Template c1mwmA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:parm; PDBTitle: parm from plasmid r1 adp form Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																													.												.	.	.
Query SS confidence																													.												.	.	.
Query Sequence		P	L	V	P	A	F	H	H	A	L	L	A	H	P	T	E	R	R	M	V	L	N	I	G	G	I	A	.	N	L	S	L	L	I	P	G	Q	P	V	.	.	.	G	G	Y	D	T	G	P	G	N	M	L	M	D	A	W	I	W	R	Q	A	G	K	P	Y	D	K	D	A	E	W	A	R	A	G	K	V	I	L
Query Conservation																													.												.	.	.
Alig confidence																													.												.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.
Template Sequence		S	I	P	A	G	Y	E	V	L	Q	E	L	D	E	L	D	S	L	L	I	I	D	L	G	G	T	T	L	D	I	S	Q	V	M	G	K	L	S	G	I	S	K	I	Y	G	D	S	S	L	G	V	S	L	V	T	S	A	V	K	D	A	L	S	L	A	R	.	.	.	.	.	.	.	.	.	T	K	G	S	S
Template Known Secondary structure											T	T	S		T	T										S	S									G	G	G										T	T														T	T			T	.	.	.	.	.	.	.	.	.	T	G	G	G
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.										.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	Q	N	M	L	S	D	P	Y	F	S	Q	P	A	P	K	S	T	G	R	E	Y	F	N	Y	G	W	L	E	R	H	L	R	H	F	P	G	V	D	P	R	D	V	Q	A	T	L	A	E	L	T	A	V	T	I	S	E	Q	V	L	L	S	G	G	C	E	R	L	M	V	C	G	G	G	S	R	N	P
Query Conservation
Alig confidence																											.												.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																											.												.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		Y	L	A	D	D	I	I	I	H	R	K	D	N	N	Y	L	K	Q	R	I	N	D	E	N	K	.	I	S	I	V	T	E	A	M	N	E	A	.	.	.	.	.	.	.	.	.	.	.	.	L	R	K	L	E	Q	R	V	L	N	T	L	N	E	F	S	G	Y	T	H	V	M	V	I	G	G	G	A	.	.	E
Template Known Secondary structure										T	T	T										S		S			.												.	.	.	.	.	.	.	.	.	.	.	.													T	T			S								S	T	T		.	.
Template Predicted Secondary structure																											.												.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.													.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.
		302	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	L	M	A	R	L	A	A	L	L	.	.	P	G	T	E	V	T	T	T	D	A	V	G	I	S	G	D	D	M	E	A	L	A	F	A	W	L	A
Query Conservation												.	.
Alig confidence												.	.										.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		L	I	C	D	A	V	K	K	H	T	Q	I	R	D	E	R	F	F	K	T	N	.	.	.	.	N	S	Q	Y	D	L	V	N	G	M	Y	L	I	G
Template Known Secondary structure												T			G	G	G					S	.	.	.	.		G	G	G
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions