 |
Job Description | Q46803 | Confidence | 90.95% | Date | Thu Jan 5 12:34:30 GMT 2012 |
Rank | 157 | Aligned Residues | 77 |
% Identity | 10% | Template | d5ldha1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.70 |
|
 |
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | G | K | K | I | A | M | T | W | A | Y | S | P | S | Y | G | K | P | L | S | V | P | Q | G | I | I | G | L | M | T | R | F | G | M | . |
. |
D | V | T | L | A | H | P | E | G | Y | D | L | I | P | D | V | V | E | V | A | K | N | N | A | K | A | S | G | G | S | F | R | Q | V | T | S | M | E | E | A | F | K | D |
Query Conservation |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   | . | . |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
I | P | D | N | K | I | T | V | V | G | V | G | . |
. |
. |
. |
. |
. |
. |
. |
Q | V | G | M | A | C | A | I | S | I | L | G | K | S | L | T | D | E | L | A | L | V | D | V | L | E | D | K | L | K | G | E | M | M | D | L | Q | H | . |
G | S | L | F | L | Q | T | P | K | I | V | A | N | K | D | Y | S | V | T | A | N |
Template Known Secondary structure |   |
|
| S | S |
|  |  |  | S |
|
| S | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S | S |  |  |  |
|
| S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | . |  | G | G | G | S |
|
|
|
|  |  |
|
| S | S | S | S | G | G | G | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
264 | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | I | V | Y | P | K | S |
Query Conservation |   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
Template Sequence |   |
S | K | I | V | V | V | T | A |
Template Known Secondary structure |   |
| S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|