|   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | S | H | L | H | E | K | D | F | L | L | T | W | E | Q | T | P | D | E | L | K | Q | V | L | D | V | A | A | A | L | K | A | L | R | A | E | N | I | S | T | K | V | F | N | S | G | L | G | I | S | V | F | R | D | N | S | T | R | T | R | F | S | Y | A | S | A | L | N | L | L | G | L | A | Q | Q | D | L | D | E |
Query Conservation |   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|
|   |
|   |   |   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |
Template Sequence |   |
M | S | V | N | L | K | G | R | S | L | L | T | L | L | D | F | S | P | E | E | I | R | Y | L | L | D | I | S | K | Q | V | K | M | E | N | R | S | K | L | R | T | E | R | F | K | G | M | T | L | A | M | I | F | E | K | R | S | T | R | T | R | L | A | F | E | T | A | F | A | E | E | G | G | H | P | I | F | L | S | P |
Template Known Secondary structure |   |
|
|
|
|
| T | T |
|
| B | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| T | T | T | T |
|  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | S | Q | I | A | H | G | E | T | V | R | E | T | A | N | M | I | S | F | C | A | D | A | I | G | I | R | D | D | M | Y | L | G | A | G | N | A | Y | M | R | E | V | G | A | A | L | D | D | G | Y | K | Q | G | V | L | P | Q | R | P | A | L | V | N | L | Q | C | D | I | D | H | P | T | Q | S | M | A | D | L | A |
Query Conservation |   |
  |   |
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|   |
|   |
|   |
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
| . |
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
Template Sequence |   |
N | D | I | H | L | G | A | K | E | S | L | E | D | T | A | R | V | L | G | R | M | V | D | A | I | M | F | R | G | Y | K | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | T | V | E | K | L | A | E | Y | S | G | V | P | V | Y | N | . |
G | L | T | D | E | F | H | P | T | Q | A | L | A | D | L | M |
Template Known Secondary structure |   |
T | T |
|
| T | T | T | S | S |
|  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S | S |
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |  | . | S |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |
  |   |
175 | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
W | L | R | E | H | F | G | S |
Query Conservation |   |
|
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|
|
Template Sequence |   |
T | I | E | E | N | F | G | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . |
  |