Return to main results Retrieve Phyre Job Id

Job DescriptionQ46803
Confidence93.55%DateThu Jan 5 12:34:30 GMT 2012
Rank132Aligned Residues109
% Identity16%Templated1ldna1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.........220 .........230.........240.........250.........260....
Predicted Secondary structure 














..















Query SS confidence 

































. .











































Query Sequence  KGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGM. . DVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA
Query Conservation   
 


 
       
   


 

       
 .. 
 
  
        
   
       
  
  
 
  


  
Alig confidence 










........














..










.































Template Conservation     







........ 

  

  

       
 
 
     .       
                   
   
Template Sequence  GGARVVVIGAG. . . . . . . . FVGASYVFALMNQGIADEIVLIDANESK. AIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDA
Template Known Secondary structure  TS


S........T

S
SS.TTSSSS



GGGTTT
Template Predicted Secondary structure 





........






.









Template SS confidence 















































































   1920......... 30.........40.........50....... ..60.........70.........80.........
 
   265....270.........280.........290.........300.........
Predicted Secondary structure 

















Query SS confidence 












































Query Sequence  DIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKD
Query Conservation 





 
 
                   

 
 
          
Alig confidence 























.....















Template Conservation 
 


        
         
.....      
   
    
Template Sequence  DLVVICAGANQKPGETRLDLVDKN. . . . . IAIFRSIVESVMASGF
Template Known Secondary structure  S

S



TTT
SGGG.....T
Template Predicted Secondary structure 










.....

Template SS confidence 












































   90.........100.........110... ......120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions