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Job Description | Q46803 | Confidence | 89.75% | Date | Thu Jan 5 12:34:30 GMT 2012 |
Rank | 170 | Aligned Residues | 122 |
% Identity | 13% | Template | c7mdhA_ |
PDB info |
PDB header:chloroplastic malate dehydrogenase | Chain: A: PDB Molecule:protein (malate dehydrogenase); |
PDBTitle: structural basis for light acitvation of a chloroplast enzyme. the2 structure of sorghum nadp-malate dehydrogenase in its oxidized form
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Resolution | 2.40 Å |
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180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | G | S | L | E | N | L | K | G | K | K | I | A | M | T | W | A | Y | S | P | S | Y | G | K | P | L | S | V | P | Q | G | I | I | G | L | M | T | R | F | G | M | . |
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H | P | E | G | Y | D | L | I | P | D | V | V | E | V | A | K | N | N | A | K | A | S | G | G | S | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | C | T | W | K | K | L | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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28 | . | 30 | . | . | . | . | |
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252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | Q | V | T | S | M | E | E | A | F | K | D | A | D | I | V | Y | P | K | S | W | A | P | Y | K | V | M | E | E | R | T | E | L | L | R | A | N | D | H | E | G | L | K | A | L | E | K | Q | C | L | A | Q | N | A | Q | H | K | D | W | H | C | T | E | E | M | M | E | L | T | R | D | G | E | A | L | Y | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | I | G | I | D | P | Y | E | V | F | E | D | V | D | W | A | L | L | I | G | A | K | P | R | G | P | G | . |
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M | E | R | A | A | L | L | D | I | N | G | Q | I | F | A | D | . |
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Q | G | K | A | L | N | A | V | A | S | K | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
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. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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