Job Description Q46803 Confidence 100.00% Date Thu Jan 5 12:34:30 GMT 2012 Rank 12 Aligned Residues 300 % Identity 26% Template c3sdsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase, mitochondrial; PDBTitle: crystal structure of a mitochondrial ornithine carbamoyltransferase2 from coccidioides immitis Resolution 2.80 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		E	K	D	F	L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	.	.	.	.	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.																																							.	.
Template Conservation																																																																																.	.
Template Sequence		P	R	H	L	L	S	I	A	D	L	T	P	T	E	F	A	T	L	V	R	N	A	S	S	Y	K	K	T	I	K	S	D	S	M	P	E	R	L	T	G	A	L	S	G	K	T	V	A	M	M	F	S	K	R	S	T	R	T	R	V	S	T	E	G	A	V	V	K	M	G	G	H	P	M	F	L	G	K	.	.
Template Known Secondary structure					B	S		G	G	G	S																				T	T	T				G	G	G	T	T	T	T	T	T								S	S																T	T								T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	I	A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		D	D	I	G	V	N	E	S	L	Y	D	T	S	V	V	I	S	S	M	V	S	C	I	V	A	R	V	G	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	I	A	N	L	A	K	H	S	S	V	P	V	I	N	A	L	C	D	T	F	.	H	P	L	Q	A	I	A	D	F	L	T	I
Template Known Secondary structure		T	T				S	S											T	S		S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S								S	S		.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160
		177	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.
Predicted Secondary structure											.	.																																																													.	.
Query SS confidence											.	.																																																													.	.
Query Sequence		R	E	H	F	G	S	L	E	N	.	.	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	.	.	A	S	G	G	S	F	R
Query Conservation											.	.																																																													.	.
Alig confidence											.	.										.	.	.	.	.	.	.																																													.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		H	E	S	F	A	H	P	S	S	L	G	L	E	G	L	K	I	A	W	V	.	.	.	.	.	.	.	G	D	A	N	N	V	L	F	D	L	A	I	A	A	T	K	M	G	V	N	V	A	V	A	T	P	R	G	Y	E	I	P	S	H	I	V	E	L	I	Q	K	A	R	E	G	V	Q	S	P	G	N	L	T
Template Known Secondary structure					T			T	T			S		T	T							.	.	.	.	.	.	.	S																T	T									T	T																T	T		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	.	.	T	R	D	G	E	A	L	Y	M	H	C
Query Conservation																																																																					.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.				.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		Q	T	T	V	P	E	V	A	V	K	D	A	D	V	I	V	T	D	T	W	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	L	E	A	F	K	D	F	K	V	T	S	E	L	A	K	R	G	G	A	K	E	.	N	W	K	F	M	H	C
Template Known Secondary structure				S						T	T	T		S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T			B									T			T	.	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.																												.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	D	I	S	G	V	S	C	K	E	G	E	V	T	E	G	V	F	E	K	Y	R	I	A	T	Y	K	E	A	S	W	K	P	Y	I	I	A	A	M	I	L	S	R	K	Y	A	K	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		L	P	R	.	.	.	.	.	.	.	H	P	E	E	V	S	D	E	V	F	Y	S	E	R	S	L	V	F	P	E	A	E	N	R	L	W	A	A	I	S	A	L	E	A	F	V	V	N	K	G
Template Known Secondary structure		S			.	.	.	.	.	.	.		T	T	T	B						T	S	T	T	B																					T	T	S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		304	.	.								.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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