Job Description Q46803 Confidence 53.60% Date Thu Jan 5 12:34:30 GMT 2012 Rank 317 Aligned Residues 163 % Identity 12% Template c3pgjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate Resolution 2.49 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.
Predicted Secondary structure																																									.																																			.	.
Query SS confidence																																									.																																			.	.
Query Sequence		Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I	A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	.	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	.	.	P	Q	R	P
Query Conservation																																									.																																			.	.
Alig confidence																							.	.	.	.															.											.	.	.	.	.	.	.	.																	.	.
Template Conservation																							.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		H	T	L	F	A	R	Q	T	Q	Q	S	M	I	Y	T	A	Q	C	V	P	V	.	.	.	.	D	G	F	T	E	A	A	K	H	F	F	A	Q	G	G	R	G	C	N	V	T	V	P	F	K	.	.	.	.	.	.	.	.	E	E	A	Y	R	F	A	D	R	L	T	E	R	A	R	L	A	G	A	V	N	T
Template Known Secondary structure									T	T												T	.	.	.	.	T												T	T								T	T	S		.	.	.	.	.	.	.	.								S										T			S
Template Predicted Secondary structure																							.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		155	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure									.																																																												.
Query SS confidence									.																																																												.
Query Sequence		A	L	V	N	L	Q	C	.	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	.	D	V	T	L	A	H	P	E	G	Y	D	L
Query Conservation									.																																																												.
Alig confidence									.																					.	.	.														.	.	.	.	.	.	.	.																.									.	.	.	.
Template Conservation																														.	.	.														.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		L	K	K	L	D	D	G	E	I	L	G	D	N	T	D	G	E	G	L	V	Q	D	L	L	A	Q	Q	V	.	.	.	L	L	K	G	A	T	I	L	L	I	G	A	G	.	.	.	.	.	.	.	.	G	A	A	R	G	V	L	K	P	L	L	D	Q	Q	P	A	S	I	T	V	T	N	R	T	.	.	.	.
Template Known Secondary structure						T	T	S																			T	T		.	.	.			T	T									S	.	.	.	.	.	.	.	.					T	T							T			S							S	S	.	.	.	.
Template Predicted Secondary structure																														.	.	.														.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	.	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S
Query Conservation																	.
Alig confidence		.	.	.	.												.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	F	A	K	A	E	Q	L	A	E	L	V	A	A	Y	G	E	V	K	A	Q	A	F	E	Q	L	K	Q	S	Y	D	V	I	I	N	S	T
Template Known Secondary structure		.	.	.	.													T	T	S							G	G	G			S			S						S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions