 |
Job Description | Q46803 | Confidence | 30.35% | Date | Thu Jan 5 12:34:30 GMT 2012 |
Rank | 384 | Aligned Residues | 80 |
% Identity | 20% | Template | c3ojlA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:cap5o; |
PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus
|
Resolution | 2.80 Å |
|
 |
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
|
|
|
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | E | H | F | G | S | L | E | N | L | K | G | K | K | I | A | M | T | W | A | Y | . |
. |
. |
. |
S | P | S | Y | G | K | P | L | S | V | P | Q | G | I | I | G | L | M | T | R | . |
F | G | M | D | V | T | L | A | H | P | E | G | Y | D | L | I | P | D | V | V | E | V | A | K | N | N | A | K | A | S | G | G | S |
Query Conservation |   |
|   |
|   |   |
|   |   |   |   |
|   |
|   |
|
|
|   |
|   |   |   | . | . | . | . |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   | . |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   | . | . |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
T | K | Q | I | I | K | . |
. |
. |
A | L | S | G | N | K | V | T | V | F | G | L | T | Y | K | G | D | V | D | D | I | R | E | . |
. |
S | P | A | F | D | I | Y | E | L | L | N | Q | E | P | D | I | E | V | C | A | Y | D | P | H | V | E | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | . | . | . |  | S | S |
|
|  |  |  |  |  |
|
| S | S | S | T | T |
|
|
|
| S | S | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |
|
|
| S | S | S |
|
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
295 | . | . | . | . | 300 | |
|
|
. | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | |
|
. | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | |
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |
|
|
|
|
| . |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | Q | V | T | S | M | E | E | A | F | K | D | A | D | . |
I | V | Y | P | K | S | W | A | P | Y | K | V | M | E |
Query Conservation |   |
|   |   |
|   |
|   |   |
|
|
|   |   |
|
| . |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|   |   |   |
|
|   |   |
|   |
Template Sequence |   |
. |
F | V | E | H | D | M | S | H | A | V | K | D | A | S | L | V | L | I | L | S | D | H | S | E | F | K | N | L | S |
Template Known Secondary structure |   |
. | T |
|
|
|
|  |  |  |  |  | T | T |
| S |
|  |  |  |
| S |
|
| G | G | G | S | S |
|
|
Template Predicted Secondary structure |   |
. |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|