Job Description Q46803 Confidence 96.31% Date Thu Jan 5 12:34:30 GMT 2012 Rank 63 Aligned Residues 104 % Identity 17% Template c3n7uD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	K	D	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																								.	.											.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																								.	.											.	.	.	.	.	.	.	.	.
Template Sequence		D	L	E	G	K	T	I	G	T	V	G	A	G	.	.	.	.	.	.	.	.	R	I	G	K	L	L	L	Q	R	L	K	P	F	G	C	N	L	L	Y	H	D	R	L	.	.	Q	M	A	P	E	L	E	K	E	T	.	.	.	.	.	.	.	.	.	G	A	K	F	V	E	D	L	N	E	M	L	P	K	C
Template Known Secondary structure			S	T	T									S	.	.	.	.	.	.	.	.											G	G	G									S	S	.	.											.	.	.	.	.	.	.	.	.	T					S	S					G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																								.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.										.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	L	P	A	D	I	S	G	V	S	C	K	E	G	E
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.	.	.
Template Sequence		D	V	I	V	I	N	M	P	L	T	E	K	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	F	N	K	E	L	I	G	K	L	K	K	.	G	V	L	I	V	N	N	A	.	.	.	.	.	.	.	.	.	R	G	A	I
Template Known Secondary structure		S						S				T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		B							T	S		T	.	T							S	.	.	.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.									.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.																																.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.										.	.	.	.
		345	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	R	Q
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions