Job Description Q46803 Confidence 100.00% Date Thu Jan 5 12:34:30 GMT 2012 Rank 23 Aligned Residues 275 % Identity 24% Template c3lxmC_ PDB info PDB header:transferase Chain: C: PDB Molecule:aspartate carbamoyltransferase; PDBTitle: 2.00 angstrom resolution crystal structure of a catalytic2 subunit of an aspartate carbamoyltransferase (pyrb) from3 yersinia pestis co92 Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	L	H	E	K	D	F	L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K
Query Conservation
Alig confidence																																.	.	.	.																																												.	.	.
Template Conservation																																.	.	.	.																																												.	.	.
Template Sequence		N	P	L	Y	H	K	H	I	I	S	I	N	D	L	S	R	D	E	L	E	L	V	L	R	T	A	A	S	L	K	.	.	.	.	K	T	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	I	H	R	L	G	A	S	V	V	G	F	S	.	.	.
Template Known Secondary structure			T	T	T	T			B			G	G	G	S																	.	.	.	.		S			T	T	T	T	T	T								S	S																T	T							S	.	.	.
Template Predicted Secondary structure																																.	.	.	.																																												.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		S	Q	I	A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	.	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W
Query Conservation																																																									.
Alig confidence		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.											.	.
Template Conservation		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		.	.	.	D	S	G	E	T	L	A	D	T	M	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	S	R	L	A	A	Q	F	S	G	N	V	P	I	V	N	A	G	D	G	.	.	A	N	P	T	Q	T	L	L	D	L	F	T
Template Known Secondary structure		.	.	.																		S							S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									S	T	T	S								T	.	.	T			T
Template Predicted Secondary structure		.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
					76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	.	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V
Query Conservation																																													.
Alig confidence								.	.	.																	.	.	.	.	.														.																			.	.	.	.
Template Conservation								.	.	.																	.	.	.	.	.																																	.	.	.	.
Template Sequence		I	Q	E	T	Q	G	.	.	.	R	L	D	N	I	N	I	A	M	V	G	D	L	K	Y	G	.	.	.	.	.	R	T	V	H	S	L	T	Q	A	L	A	K	F	N	G	N	H	F	F	F	I	A	P	D	A	L	A	M	P	A	Y	I	.	.	.	.	L	Q	M	L	E	E	K	E	I	E	Y	S	L	H
Template Known Secondary structure							S	.	.	.		S	S	S							S		T	T	T		.	.	.	.	.											T	T	S	S	S									G	G	G							.	.	.	.							T	T
Template Predicted Secondary structure								.	.	.																	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		146	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	L	P	A	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.	.
Template Sequence		E	S	L	E	E	V	V	P	E	L	D	I	L	Y	M	T	I	L	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	L	T	G	A	R	D	.	N	L	K	V	L	H	P	L	P	.	.
Template Known Secondary structure		S		S	T	T	T	G	G	G		S							B		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T			T	.	T							S		.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																																									.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	V	S	C	K	E	G	E	V	T	E	G	V	F	E	K	Y	R	I	A	T	Y	K	E	A	S	W	K	P	Y	I	I	A	A	M	I	L	S	R	K	Y	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	I	D	E	I	T	T	D	V	D	K	T	P	Y	A	Y	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N	A	E
Template Known Secondary structure		.	.	.	.	.	.		S	S	S	B		T					S	T	T	B								T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions