Job Description Q46803 Confidence 25.87% Date Thu Jan 5 12:34:30 GMT 2012 Rank 405 Aligned Residues 73 % Identity 19% Template c3lk7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a Resolution 1.50 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	.
Query Conservation																																																																																	.
Alig confidence														.	.	.	.	.	.	.							.																													.	.	.	.	.																					.
Template Conservation														.	.	.	.	.	.	.							.																													.	.	.	.	.
Template Sequence		I	T	T	F	E	N	K	K	V	L	V	L	.	.	.	.	.	.	.	G	L	A	R	S	G	.	E	A	A	A	R	L	L	A	K	L	G	A	I	V	T	V	N	D	G	K	P	F	D	E	N	P	T	A	.	.	.	.	.	Q	S	L	L	E	E	G	I	K	V	V	C	G	S	H	P	L	E	L	L	D
Template Known Secondary structure				T	T	T	T							.	.	.	.	.	.	.			T	T	T		.										T	T								S	S		G	G	G					.	.	.	.	.						T	T						S				G	G	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.							.																													.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		262	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	A	D	I	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	F	C	Y	X	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions