Job Description Q46803 Confidence 35.83% Date Thu Jan 5 12:34:30 GMT 2012 Rank 367 Aligned Residues 153 % Identity 14% Template c3k8zD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis Resolution 2.40 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																	.																		.	.	.	.	.	.	.
Query SS confidence																																	.																		.	.	.	.	.	.	.
Query Sequence		E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	.	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	.	.	.	.	.	.	.	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I	A
Query Conservation																																	.																		.	.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.	.			.																		.	.	.	.	.	.	.
Template Conservation											.														.	.	.	.	.	.
Template Sequence		N	V	T	E	K	E	V	K	A	.	L	S	I	W	M	S	L	K	C	G	I	I	D	.	.	.	.	.	.	L	P	Y	G	G	G	K	G	G	I	V	C	D	P	R	D	M	S	F	R	E	L	E	R	L	S	R	G	Y	V	R	A	I	S	Q	I	V	G	P	T	K	D	V	P	A	P	D	V	F	T	N
Template Known Secondary structure		T									.													T	.	.	.	.	.	.		S												G	G	G	S																	G	G	G		B	T	T	T					B		T	T
Template Predicted Secondary structure											.														.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		101	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		H	G	E	T	.	.	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E
Query Conservation						.	.
Alig confidence						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		S	Q	I	M	A	W	M	M	D	E	Y	S	R	I	D	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	P	G	F	I	T	G	K	P	L	V	L	G	G	S	H	G	R	E	S	A	T	.	A	K	G	V	T	I	C	I	K	E
Template Known Secondary structure																	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	S	S	S			G	G	G	T			S			T	T			.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																														.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		H	F	G	S	L	E	.	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H
Query Conservation								.
Alig confidence								.														.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		A	A	K	K	R	G	I	D	I	K	G	A	R	V	V	V	Q	G	F	G	.	.	.	.	.	.	.	.	N	A	G	S	Y	L	A	K	F	M	H	D	A	G	A	K	V	V	G	I	S
Template Known Secondary structure						T	T			G	G	G									S	.	.	.	.	.	.	.	.	S												T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions