Job Description Q46803 Confidence 100.00% Date Thu Jan 5 12:34:30 GMT 2012 Rank 20 Aligned Residues 293 % Identity 24% Template c3grfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	K	D	F	L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I
Query Conservation
Alig confidence																														.	.																																												.	.	.	.	.	.	.
Template Conservation																														.	.																																												.	.	.	.	.	.	.
Template Sequence		Q	T	R	H	L	L	T	I	S	A	L	C	P	K	E	L	A	Y	L	I	D	R	A	L	D	M	K	K	.	.	N	P	A	K	Y	T	A	R	A	A	N	K	T	L	L	A	F	F	A	K	P	S	L	R	T	R	V	S	L	E	T	A	M	T	R	L	G	G	H	A	I	Y	Y	.	.	.	.	.	.	.
Template Known Secondary structure			S			B	S	S	G	G	G	S																		.	.		G	G	G	G	T	T	T	T	T	T								S	S																	T							.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.																																												.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H
Query Conservation
Alig confidence		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	E	L	T	V	Q	D	T	A	E	V	F	S	R	M	V	D	I	C	T	A	R	L	A	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	M	R	E	M	A	Q	H	A	S	V	P	C	I	N	A	L	D	D	F	G	.	H	P	L	Q	M	V	C	D	F	M	T	I	K	E	K
Template Known Secondary structure		.	.												T	T	T		S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S					S	S		S	S		.
Template Predicted Secondary structure		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
				76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250
Predicted Secondary structure						.	.	.	.																						.																									.	.																				.	.
Query SS confidence						.	.	.	.																						.																									.	.																				.	.
Query Sequence		F	G	S	L	.	.	.	.	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	.	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	.	.	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	.	.	G	G	S
Query Conservation						.	.	.	.																						.																									.	.																				.	.
Alig confidence						.	.	.	.												.	.	.	.	.	.	.				.																									.	.																				.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		F	T	A	A	G	E	F	S	N	G	F	K	G	I	K	F	A	Y	C	.	.	.	.	.	.	.	G	D	S	M	N	N	V	T	Y	D	L	M	R	G	C	A	L	L	G	M	E	C	H	V	C	C	P	D	H	K	D	F	K	P	I	K	E	V	I	D	E	C	E	E	I	I	A	K	H	G	T	G	G	S
Template Known Secondary structure					T	T			T	T	T	G	G	G							.	.	.	.	.	.	.	S			S	S														T									S	S	G	G	G	S																	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		I	K	I	F	H	D	C	K	K	G	C	E	G	V	D	V	V	Y	T	D	S	W	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	R	L	K	V	L	T	P	F	Q	V	D	D	A	V	M	A	V	T	S	K	.	R	S	I	F	M	N	C
Template Known Secondary structure						S	S						T	T		S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T						G	G	G		B						T	T	S		T	.	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																											.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	D	I	S	G	V	S	C	K	E	G	E	V	T	E	G	V	F	E	K	Y	R	I	A	T	Y	K	E	A	S	W	K	P	Y	I	I	A	A	M	I	L	S	R	K	Y	A	K
Query Conservation
Alig confidence						.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		L	P	A	T	.	.	.	.	.	.	R	G	E	E	Q	T	A	S	V	I	D	G	P	K	S	V	C	Y	D	E	A	G	N	R	L	H	S	A	M	A	V	L	D	F	F	L	H	D	C
Template Known Secondary structure		S				.	.	.	.	.	.	T	T	T	T	B						T	S	T	T	B																						S
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		282	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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