Return to main results Retrieve Phyre Job Id

Job DescriptionQ46803
Confidence87.45%DateThu Jan 5 12:34:30 GMT 2012
Rank187Aligned Residues88
% Identity23%Templatec3g79A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190....... ..200.........210.........220.........230.........240
Predicted Secondary structure 











....

















Query SS confidence 
































. . . .










































Query Sequence  HPTQSMADLAWLREHFGSLENLKGKKIAMTWAY. . . . SPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVA
Query Conservation 








 

 
  
    
 
 


 
   ....    
   


 

       
  
 
  
        
   
Alig confidence 
















..













....





..




























......
Template Conservation              
    ..       








  
 
 
 ..


  
   
   

 
  


 
     ......
Template Sequence  MPAHMYNLTVAALERLG. . KKMDGSKVAMLGWAFIKDSDDARN. . TPSEPYRDLCLKAGASVMVHDPYVVNYPG. . . . . .
Template Known Secondary structure  TTT..

STT

SSSSTT
S

TT..
TT

SS


BTT......
Template Predicted Secondary structure 
..










..












......
Template SS confidence 















































































   332.......340........ .350.........360.........370.. .......380.........390.........400.
 
   241........250.........260..... ....270..
Predicted Secondary structure 









.


Query SS confidence 
























.






Query Sequence  KNNAKASGGSFRQVTSMEEAFKDAD. IVYPKSW
Query Conservation         
  
  
 
  


  

.




 
Alig confidence  ..........














.






Template Conservation  ..........         
   





 
  
Template Sequence  . . . . . . . . . . VEISDNLEEVVRNADAIVVLAGH
Template Known Secondary structure  ..........B
S
TT
S
S

Template Predicted Secondary structure  ..........












Template SS confidence 
































   402.......410.........420....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions