Job Description Q46803 Confidence 46.37% Date Thu Jan 5 12:34:30 GMT 2012 Rank 338 Aligned Residues 94 % Identity 19% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	.	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E
Query Conservation																																																													.
Alig confidence																				.	.	.		.	.	.	.	.	.	.	.												.	.	.	.	.														.													.
Template Conservation																				.	.	.		.	.	.	.	.	.	.	.												.	.	.	.	.																											.
Template Sequence		T	G	M	F	P	F	K	V	Q	L	M	G	G	V	A	L	H	D	.	.	.	G	.	.	.	.	.	.	.	.	N	I	A	E	M	K	T	G	E	G	K	.	.	.	.	.	T	L	T	S	T	L	P	V	Y	L	N	A	L	T	G	K	G	V	H	V	V	T	V	N	E	Y	.	L	A	S	R	D	A	E
Template Known Secondary structure		S	S					S	T	T										.	.	.	S	.	.	.	.	.	.	.	.	S					S	S	S	S		T	.	.	.	.	.													T	T	S	S							S				.
Template Predicted Secondary structure																				.	.	.		.	.	.	.	.	.	.	.												.	.	.	.	.																											.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.									.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		V	A	K	N	N	A	K	A	S	G	G	S	F	R	.	.	.	.	.	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		Q	M	G	K	I	F	E	F	L	G	L	T	V	G	L	N	L	N	S	M	S	K	D	E	K	R	E	A	Y	A	A	D	I	T	Y	S	T
Template Known Secondary structure			T							T	T					B			S	S			S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions