 |
Job Description | Q46803 | Confidence | 94.68% | Date | Thu Jan 5 12:34:30 GMT 2012 |
Rank | 109 | Aligned Residues | 77 |
% Identity | 13% | Template | c3dfzB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:precorrin-2 dehydrogenase; |
PDBTitle: sirc, precorrin-2 dehydrogenase
|
Resolution | 2.30 Å |
|
 |
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | G | S | L | E | N | L | K | G | K | K | I | A | M | T | W | A | Y | S | P | S | Y | G | K | P | L | S | V | P | Q | G | I | I | G | L | M | T | R | F | G | M | D | V | T | L | A | H | P | E | G | Y | D | L | I | P | D | V | V | E | V | A | K | N | N | A | K | A | S | G | G | S | F | R | Q | V | T | S | M | E | E |
Query Conservation |   |
  |
|   |   |   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|   |   |   |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |   |
|
|   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|
|   | . | . | . |   |   |   |   |   |   | . | . | . | . |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | T | V | M | L | D | L | K | G | R | S | V | L | V | V | G | G | G | . |
. |
. |
. |
. |
. |
. |
. |
T | I | A | T | R | R | I | K | G | F | L | Q | E | G | A | A | I | T | V | V | A | P | . |
. |
. |
T | V | S | A | E | I | . |
. |
. |
. |
N | E | W | E | A | K | G | Q | L | R | V | K | R | K | K | V | G | E | E |
Template Known Secondary structure |   |
|
|
|
|
|
|
| T | T |
|  |  |  |  |  |
|
| S | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |
| S | . | . | . | S |
|
|  |  |  | . | . | . | . |  |  |  |  |  | T | T | S |  |  |  |  |
| S |
|
|
| G | G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
. | . | . | . | . | . | |
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | F | K | D | A | D | I | V | Y | P | K | S |
Query Conservation |   |
|
|   |   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|
|
|   |
|
|
Template Sequence |   |
D | L | L | N | V | F | F | I | V | V | A | T |
Template Known Secondary structure |   |
G | G | S | S |
| S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|