Job Description Q46803 Confidence 62.77% Date Thu Jan 5 12:34:30 GMT 2012 Rank 290 Aligned Residues 196 % Identity 16% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	.	.	.	.	.	.	.	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I	A	H
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation											.														.	.	.	.	.
Template Sequence		E	V	T	L	S	E	V	M	A	.	L	A	G	W	M	T	I	K	N	A	A	V	G	.	.	.	.	.	L	P	Y	G	G	G	K	G	G	I	R	V	D	P	R	K	L	S	P	G	E	L	E	R	L	T	R	R	Y	T	S	E	I	G	I	L	L	G	P	D	R	D	I	P	A	P	D	V	N	T	G	E
Template Known Secondary structure		T									.													T	.	.	.	.	.		S												G	G	G	S																	G	G	G		B	T	T	T					B		T	T
Template Predicted Secondary structure											.														.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		102	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		G	E	T	.	.	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H
Query Conservation					.	.
Alig confidence					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		R	E	M	A	W	M	M	D	T	Y	S	M	N	V	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	P	G	V	V	T	G	K	P	I	A	L	G	G	S	.	L	G	R	R	D	A	T	G	R	G	V	F	I	T	A	A	A	A
Template Known Secondary structure																T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	S	S	S			G	G	G	T			.	T	T		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure							.																																											.	.	.	.	.	.	.	.
Query SS confidence							.																																											.	.	.	.	.	.	.	.
Query Sequence		F	G	S	L	E	.	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	.	.	.	.	.	.	.	.	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S
Query Conservation							.																																											.	.	.	.	.	.	.	.
Alig confidence							.														.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.							.
Template Conservation																					.	.	.	.	.	.	.	.																																				.
Template Sequence		A	E	K	I	G	L	Q	V	E	G	A	R	V	A	I	Q	G	F	G	.	.	.	.	.	.	.	.	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	.	Y	D	L	L	R	H	V	Q	E	F	G	G	V	R	G	Y	P
Template Known Secondary structure						T			S	T	T									S	.	.	.	.	.	.	.	.													T	T									S	S						T	T					.										T	S	S	S	T	T		T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																																				.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.									.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		251	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		F	R	Q	V	T	S	M	E	E	A	F	.	K	D	A	D	I	V	Y	P
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		K	A	E	P	L	P	A	A	D	F	W	G	L	P	V	E	F	L	V	P
Template Known Secondary structure		T	S									T	T				S
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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