Job Description Q46803 Confidence 84.90% Date Thu Jan 5 12:34:30 GMT 2012 Rank 198 Aligned Residues 62 % Identity 24% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																				.	.	.	.	.																.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																				.	.	.	.	.																.	.	.	.	.	.
Template Sequence		D	K	K	I	G	F	L	G	L	G	.	.	.	.	.	.	.	.	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	.	.	.	.	.	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	.	.	.	.	.	.	A	R	L	G	R	T	P	A	E	V	V	S	T	C	D	I	T
Template Known Secondary structure		S	S								S	.	.	.	.	.	.	.	.													T	T						.	.	.	.	.			S	S	G	G	G	G						T	T	.	.	.	.	.	.					S										S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																				.	.	.	.	.																.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.									.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310							.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		268
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		328

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions