 |
Job Description | Q46803 | Confidence | 95.32% | Date | Thu Jan 5 12:34:30 GMT 2012 |
Rank | 90 | Aligned Residues | 114 |
% Identity | 11% | Template | c2qm3A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:predicted methyltransferase; |
PDBTitle: crystal structure of a predicted methyltransferase from pyrococcus2 furiosus
|
Resolution | 2.05 Å |
|
 |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | A | L | D | D | G | Y | K | Q | G | V | L | P | Q | R | P | A | L | V | N | L | Q | C | D | I | D | H | P | T | Q | S | M | A | D | L | A | W | L | R | E | H | F | G | S | L | E | N | L | K | G | K | K | I | A | M | T | W | A | Y | S | P | S | Y | G | K | P | L | S | V | P | Q | G | I | I | G | L | M | T | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |
|   |   |   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   | . |   |
|
|   |   |   |
|   |
|
|   |
|   |
|
|   |   |   |   |   |   | . | . | . | . |   |
|
|   |
|
|   |
|
|   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|   |   |
Template Sequence |   |
A | D | L | L | E | Q | F | R | E | I | V | K | D | R | P | E | P | L | H | E | . |
F | D | Q | A | Y | V | T | P | E | T | T | V | A | R | V | I | L | X | H | T | R | . |
. |
. |
. |
G | D | L | E | N | K | D | I | F | V | L | G | D | D | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | S | I | A | L | X | L | S | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
| G | G | . | G | T |
|
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | T |
| S | T | T |
|  |  |  |  |  | S |
| T | T |
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . |
  |
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
. | . | . | . | |
. | . | . | . | . | 260 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 270 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  | . |
|
|  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
F | G | M | D | V | T | L | A | H | P | E | G | Y | D | L | I | P | D | V | V | E | V | A | K | N | N | A | K | A | S | G | G | S | . |
F | R | Q | V | . |
T | S | M | E | E | A | F | K | . |
. |
. |
. |
. |
D | A | D | I | V | Y | P | K |
Query Conservation |   |
  |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   | . |
|   |   |
| . |   |
|   |   |
|
|
|   | . | . | . | . | . |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|
Template Sequence |   |
L | P | K | R | I | A | V | L | . |
. |
. |
. |
. |
D | I | D | E | R | L | T | K | F | I | E | K | A | A | N | E | I | G | Y | E | D | I | E | I | F | T | F | D | L | R | K | P | L | P | D | Y | A | L | H | K | F | D | T | F | I | T | D |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  | . | . | . | . | . |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |
|
|
| T | T | S |
|
|
| T | T | T | S | S |
| B | S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
170 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|