Job Description Q46803 Confidence 52.29% Date Thu Jan 5 12:34:30 GMT 2012 Rank 326 Aligned Residues 101 % Identity 11% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	M	A	D	L	A	W	L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S
Query Conservation
Alig confidence																																												.																									.	.
Template Conservation																																												.																									.	.
Template Sequence		A	T	V	Y	E	A	L	K	E	A	L	G	G	E	A	R	L	P	V	L	K	D	R	N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	.	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	.	.	R	E	Q	L	R	L	L	G	E	K	V
Template Known Secondary structure												T	T	S	S								S	S								S	T	T	S	S								.							T	T	T											S	S	T	T		.	.
Template Predicted Secondary structure																																												.																									.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.
		248	.	250	.	.	.	.				.	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure									.	.	.							.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.							.	.	.	.	.	.	.	.	.
Query Sequence		G	G	S	F	R	Q	V	.	.	.	T	S	M	E	E	A	.	.	.	.	.	.	.	.	.	F	K	D	A	D	I	V	Y	P	K	S
Query Conservation									.	.	.							.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T
Template Known Secondary structure		T								T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions